Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.9■■■□□ 2.06
Sptlc3Q8BG54 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sptlc3Q8BG54 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Sptlc3Q8BG54 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
Sptlc3Q8BG54 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Sptlc3Q8BG54 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.89■■■□□ 2.05
Sptlc3Q8BG54 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
Sptlc3Q8BG54 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sptlc3Q8BG54 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sptlc3Q8BG54 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Sptlc3Q8BG54 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sptlc3Q8BG54 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sptlc3Q8BG54 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Sptlc3Q8BG54 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Sptlc3Q8BG54 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Sptlc3Q8BG54 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.84■■■□□ 2.05
Sptlc3Q8BG54 Gm12366-201ENSMUST00000121722 873 ntBASIC27.84■■■□□ 2.05
Sptlc3Q8BG54 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.84■■■□□ 2.05
Sptlc3Q8BG54 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.84■■■□□ 2.05
Sptlc3Q8BG54 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Sptlc3Q8BG54 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.84■■■□□ 2.05
Sptlc3Q8BG54 Gm5786-201ENSMUST00000085368 882 ntBASIC27.84■■■□□ 2.05
Sptlc3Q8BG54 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Sptlc3Q8BG54 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Sptlc3Q8BG54 Gm27502-201ENSMUST00000183495 199 ntBASIC27.83■■■□□ 2.05
Sptlc3Q8BG54 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Sptlc3Q8BG54 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Sptlc3Q8BG54 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Sptlc3Q8BG54 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Sptlc3Q8BG54 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sptlc3Q8BG54 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.81■■■□□ 2.04
Sptlc3Q8BG54 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sptlc3Q8BG54 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Sptlc3Q8BG54 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sptlc3Q8BG54 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sptlc3Q8BG54 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sptlc3Q8BG54 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.8■■■□□ 2.04
Sptlc3Q8BG54 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Sptlc3Q8BG54 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Sptlc3Q8BG54 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sptlc3Q8BG54 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Sptlc3Q8BG54 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Sptlc3Q8BG54 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sptlc3Q8BG54 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sptlc3Q8BG54 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.78■■■□□ 2.04
Sptlc3Q8BG54 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Sptlc3Q8BG54 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sptlc3Q8BG54 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.76■■■□□ 2.04
Sptlc3Q8BG54 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Sptlc3Q8BG54 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.76■■■□□ 2.03
Sptlc3Q8BG54 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sptlc3Q8BG54 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.76■■■□□ 2.03
Sptlc3Q8BG54 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Sptlc3Q8BG54 AC153911.1-201ENSMUST00000220378 758 ntBASIC27.76■■■□□ 2.03
Sptlc3Q8BG54 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sptlc3Q8BG54 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Sptlc3Q8BG54 Terc-201ENSMUST00000082862 423 ntBASIC27.75■■■□□ 2.03
Sptlc3Q8BG54 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Sptlc3Q8BG54 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.75■■■□□ 2.03
Sptlc3Q8BG54 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Sptlc3Q8BG54 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.74■■■□□ 2.03
Sptlc3Q8BG54 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Sptlc3Q8BG54 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Sptlc3Q8BG54 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Sptlc3Q8BG54 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.73■■■□□ 2.03
Sptlc3Q8BG54 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sptlc3Q8BG54 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
Sptlc3Q8BG54 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.72■■■□□ 2.03
Sptlc3Q8BG54 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sptlc3Q8BG54 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sptlc3Q8BG54 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.71■■■□□ 2.03
Sptlc3Q8BG54 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sptlc3Q8BG54 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Sptlc3Q8BG54 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Sptlc3Q8BG54 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
Sptlc3Q8BG54 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Sptlc3Q8BG54 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Sptlc3Q8BG54 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sptlc3Q8BG54 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Sptlc3Q8BG54 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sptlc3Q8BG54 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sptlc3Q8BG54 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Sptlc3Q8BG54 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.66■■■□□ 2.02
Sptlc3Q8BG54 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Sptlc3Q8BG54 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Sptlc3Q8BG54 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Sptlc3Q8BG54 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.65■■■□□ 2.02
Sptlc3Q8BG54 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Sptlc3Q8BG54 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Sptlc3Q8BG54 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.64■■■□□ 2.02
Sptlc3Q8BG54 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Sptlc3Q8BG54 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.63■■■□□ 2.01
Sptlc3Q8BG54 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.63■■■□□ 2.01
Sptlc3Q8BG54 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Sptlc3Q8BG54 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Sptlc3Q8BG54 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sptlc3Q8BG54 Gm14523-201ENSMUST00000117260 558 ntBASIC27.62■■■□□ 2.01
Sptlc3Q8BG54 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sptlc3Q8BG54 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Sptlc3Q8BG54 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms