Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim36Q80WG7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim36Q80WG7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim36Q80WG7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim36Q80WG7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Trim36Q80WG7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim36Q80WG7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim36Q80WG7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim36Q80WG7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim36Q80WG7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim36Q80WG7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim36Q80WG7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim36Q80WG7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim36Q80WG7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim36Q80WG7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Trim36Q80WG7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim36Q80WG7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Gm30023-201ENSMUST00000197970 889 ntBASIC21.94■■□□□ 1.1
Trim36Q80WG7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim36Q80WG7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.93■■□□□ 1.1
Trim36Q80WG7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim36Q80WG7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim36Q80WG7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.93■■□□□ 1.1
Trim36Q80WG7 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.93■■□□□ 1.1
Trim36Q80WG7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim36Q80WG7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Trim36Q80WG7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim36Q80WG7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim36Q80WG7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim36Q80WG7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim36Q80WG7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim36Q80WG7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim36Q80WG7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.9■■□□□ 1.1
Trim36Q80WG7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim36Q80WG7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trim36Q80WG7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Trim36Q80WG7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Trim36Q80WG7 Gm7432-201ENSMUST00000210343 879 ntBASIC21.89■■□□□ 1.09
Trim36Q80WG7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim36Q80WG7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim36Q80WG7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim36Q80WG7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim36Q80WG7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim36Q80WG7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim36Q80WG7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim36Q80WG7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Trim36Q80WG7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim36Q80WG7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim36Q80WG7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim36Q80WG7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim36Q80WG7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Trim36Q80WG7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Trim36Q80WG7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Trim36Q80WG7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim36Q80WG7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim36Q80WG7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim36Q80WG7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Trim36Q80WG7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim36Q80WG7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim36Q80WG7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim36Q80WG7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Trim36Q80WG7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim36Q80WG7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Trim36Q80WG7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim36Q80WG7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim36Q80WG7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim36Q80WG7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim36Q80WG7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim36Q80WG7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim36Q80WG7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms