Protein–RNA interactions for Protein: Q80TT8

Cul9, Cullin-9, mousemouse

Predictions only

Length 1,865 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul9Q80TT8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC34.6■■■■□ 3.13
Cul9Q80TT8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Cul9Q80TT8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Cul9Q80TT8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Cul9Q80TT8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Cul9Q80TT8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Cul9Q80TT8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Cul9Q80TT8 AC093043.1-201ENSMUST00000226700 898 ntBASIC34.58■■■■□ 3.13
Cul9Q80TT8 Terc-201ENSMUST00000082862 423 ntBASIC34.58■■■■□ 3.13
Cul9Q80TT8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
Cul9Q80TT8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
Cul9Q80TT8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
Cul9Q80TT8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Cul9Q80TT8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Cul9Q80TT8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Cul9Q80TT8 Gm14117-201ENSMUST00000122417 843 ntBASIC34.56■■■■□ 3.12
Cul9Q80TT8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Cul9Q80TT8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC34.56■■■■□ 3.12
Cul9Q80TT8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC34.56■■■■□ 3.12
Cul9Q80TT8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
Cul9Q80TT8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
Cul9Q80TT8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC34.54■■■■□ 3.12
Cul9Q80TT8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Cul9Q80TT8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC34.54■■■■□ 3.12
Cul9Q80TT8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Cul9Q80TT8 Gm15820-201ENSMUST00000201566 728 ntBASIC34.52■■■■□ 3.12
Cul9Q80TT8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
Cul9Q80TT8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Cul9Q80TT8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
Cul9Q80TT8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC34.51■■■■□ 3.12
Cul9Q80TT8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
Cul9Q80TT8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC34.51■■■■□ 3.11
Cul9Q80TT8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Cul9Q80TT8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
Cul9Q80TT8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
Cul9Q80TT8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Cul9Q80TT8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC34.48■■■■□ 3.11
Cul9Q80TT8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC34.48■■■■□ 3.11
Cul9Q80TT8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC34.48■■■■□ 3.11
Cul9Q80TT8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Cul9Q80TT8 AC153911.1-201ENSMUST00000220378 758 ntBASIC34.48■■■■□ 3.11
Cul9Q80TT8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
Cul9Q80TT8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Cul9Q80TT8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC34.45■■■■□ 3.11
Cul9Q80TT8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC34.45■■■■□ 3.1
Cul9Q80TT8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC34.44■■■■□ 3.1
Cul9Q80TT8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Cul9Q80TT8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Cul9Q80TT8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Cul9Q80TT8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC34.43■■■■□ 3.1
Cul9Q80TT8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
Cul9Q80TT8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC34.41■■■■□ 3.1
Cul9Q80TT8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC34.41■■■■□ 3.1
Cul9Q80TT8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Cul9Q80TT8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Cul9Q80TT8 Gm13238-201ENSMUST00000117655 780 ntBASIC34.39■■■■□ 3.1
Cul9Q80TT8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Cul9Q80TT8 Gm14121-201ENSMUST00000121441 1380 ntBASIC34.38■■■■□ 3.09
Cul9Q80TT8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
Cul9Q80TT8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Cul9Q80TT8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Cul9Q80TT8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC34.37■■■■□ 3.09
Cul9Q80TT8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Cul9Q80TT8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC34.37■■■■□ 3.09
Cul9Q80TT8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC34.36■■■■□ 3.09
Cul9Q80TT8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC34.36■■■■□ 3.09
Cul9Q80TT8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Cul9Q80TT8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Cul9Q80TT8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Cul9Q80TT8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
Cul9Q80TT8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Cul9Q80TT8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Cul9Q80TT8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Cul9Q80TT8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Cul9Q80TT8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC34.34■■■■□ 3.09
Cul9Q80TT8 Gm45444-201ENSMUST00000211394 898 ntBASIC34.33■■■■□ 3.09
Cul9Q80TT8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC34.33■■■■□ 3.09
Cul9Q80TT8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC34.31■■■■□ 3.08
Cul9Q80TT8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Cul9Q80TT8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Cul9Q80TT8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Cul9Q80TT8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC34.3■■■■□ 3.08
Cul9Q80TT8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Cul9Q80TT8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC34.29■■■■□ 3.08
Cul9Q80TT8 Rps24-207ENSMUST00000224568 714 ntBASIC34.29■■■■□ 3.08
Cul9Q80TT8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Cul9Q80TT8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC34.29■■■■□ 3.08
Cul9Q80TT8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Cul9Q80TT8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Cul9Q80TT8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
Cul9Q80TT8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC34.27■■■■□ 3.08
Cul9Q80TT8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Cul9Q80TT8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC34.27■■■■□ 3.08
Cul9Q80TT8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
Cul9Q80TT8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Cul9Q80TT8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Cul9Q80TT8 Gm43592-201ENSMUST00000196922 1165 ntBASIC34.24■■■■□ 3.07
Cul9Q80TT8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC34.23■■■■□ 3.07
Cul9Q80TT8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC34.23■■■■□ 3.07
Cul9Q80TT8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms