Protein–RNA interactions for Protein: Q7TMX5

Shq1, Protein SHQ1 homolog, mousemouse

Predictions only

Length 569 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shq1Q7TMX5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
Shq1Q7TMX5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC32.63■■■□□ 2.81
Shq1Q7TMX5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Shq1Q7TMX5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Shq1Q7TMX5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Shq1Q7TMX5 Gm10420-201ENSMUST00000121713 882 ntBASIC32.61■■■□□ 2.81
Shq1Q7TMX5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC32.61■■■□□ 2.81
Shq1Q7TMX5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
Shq1Q7TMX5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Shq1Q7TMX5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC32.6■■■□□ 2.81
Shq1Q7TMX5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
Shq1Q7TMX5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
Shq1Q7TMX5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Shq1Q7TMX5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
Shq1Q7TMX5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Shq1Q7TMX5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
Shq1Q7TMX5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
Shq1Q7TMX5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Shq1Q7TMX5 Terc-201ENSMUST00000082862 423 ntBASIC32.56■■■□□ 2.8
Shq1Q7TMX5 Gm14121-201ENSMUST00000121441 1380 ntBASIC32.56■■■□□ 2.8
Shq1Q7TMX5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Shq1Q7TMX5 AC153911.1-201ENSMUST00000220378 758 ntBASIC32.55■■■□□ 2.8
Shq1Q7TMX5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Shq1Q7TMX5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Shq1Q7TMX5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Shq1Q7TMX5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC32.52■■■□□ 2.8
Shq1Q7TMX5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Shq1Q7TMX5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Shq1Q7TMX5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Shq1Q7TMX5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Shq1Q7TMX5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Shq1Q7TMX5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Shq1Q7TMX5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC32.49■■■□□ 2.79
Shq1Q7TMX5 Gm5812-201ENSMUST00000061073 957 ntBASIC32.49■■■□□ 2.79
Shq1Q7TMX5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC32.48■■■□□ 2.79
Shq1Q7TMX5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Shq1Q7TMX5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Shq1Q7TMX5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
Shq1Q7TMX5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC32.47■■■□□ 2.79
Shq1Q7TMX5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Shq1Q7TMX5 Gm5921-201ENSMUST00000075898 882 ntBASIC32.47■■■□□ 2.79
Shq1Q7TMX5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Shq1Q7TMX5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Shq1Q7TMX5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Shq1Q7TMX5 Gm37847-201ENSMUST00000192163 1497 ntBASIC32.46■■■□□ 2.79
Shq1Q7TMX5 Gm31748-201ENSMUST00000194938 1497 ntBASIC32.46■■■□□ 2.79
Shq1Q7TMX5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Shq1Q7TMX5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC32.44■■■□□ 2.78
Shq1Q7TMX5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Shq1Q7TMX5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Shq1Q7TMX5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC32.44■■■□□ 2.78
Shq1Q7TMX5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Shq1Q7TMX5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Shq1Q7TMX5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC32.43■■■□□ 2.78
Shq1Q7TMX5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC32.41■■■□□ 2.78
Shq1Q7TMX5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
Shq1Q7TMX5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Shq1Q7TMX5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
Shq1Q7TMX5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Shq1Q7TMX5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Shq1Q7TMX5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Shq1Q7TMX5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Shq1Q7TMX5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Shq1Q7TMX5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
Shq1Q7TMX5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC32.37■■■□□ 2.77
Shq1Q7TMX5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Shq1Q7TMX5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Shq1Q7TMX5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC32.36■■■□□ 2.77
Shq1Q7TMX5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Shq1Q7TMX5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Shq1Q7TMX5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Shq1Q7TMX5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Shq1Q7TMX5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC32.34■■■□□ 2.77
Shq1Q7TMX5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.77
Shq1Q7TMX5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Shq1Q7TMX5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Shq1Q7TMX5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Shq1Q7TMX5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Shq1Q7TMX5 Gm6206-201ENSMUST00000133472 2199 ntBASIC32.3■■■□□ 2.76
Shq1Q7TMX5 Gm22567-201ENSMUST00000175542 342 ntBASIC32.3■■■□□ 2.76
Shq1Q7TMX5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Shq1Q7TMX5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC32.28■■■□□ 2.76
Shq1Q7TMX5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Shq1Q7TMX5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Shq1Q7TMX5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC32.27■■■□□ 2.76
Shq1Q7TMX5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Shq1Q7TMX5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Shq1Q7TMX5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Shq1Q7TMX5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Shq1Q7TMX5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Shq1Q7TMX5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Shq1Q7TMX5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC32.25■■■□□ 2.75
Shq1Q7TMX5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Shq1Q7TMX5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Shq1Q7TMX5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
Shq1Q7TMX5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC32.23■■■□□ 2.75
Shq1Q7TMX5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC32.21■■■□□ 2.75
Shq1Q7TMX5 Gm44428-201ENSMUST00000204474 874 ntBASIC32.21■■■□□ 2.75
Shq1Q7TMX5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Shq1Q7TMX5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms