Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Srsf1Q6PDM2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
Srsf1Q6PDM2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Srsf1Q6PDM2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Srsf1Q6PDM2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.35■□□□□ 0.85
Srsf1Q6PDM2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Srsf1Q6PDM2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Srsf1Q6PDM2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Srsf1Q6PDM2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.34■□□□□ 0.85
Srsf1Q6PDM2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Srsf1Q6PDM2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.34■□□□□ 0.85
Srsf1Q6PDM2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Srsf1Q6PDM2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Srsf1Q6PDM2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Srsf1Q6PDM2 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.33■□□□□ 0.85
Srsf1Q6PDM2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.33■□□□□ 0.85
Srsf1Q6PDM2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Srsf1Q6PDM2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Srsf1Q6PDM2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Srsf1Q6PDM2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Srsf1Q6PDM2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Srsf1Q6PDM2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Srsf1Q6PDM2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Srsf1Q6PDM2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Srsf1Q6PDM2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Srsf1Q6PDM2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Srsf1Q6PDM2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Srsf1Q6PDM2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Srsf1Q6PDM2 Gm43566-201ENSMUST00000196851 808 ntBASIC20.3■□□□□ 0.84
Srsf1Q6PDM2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.3■□□□□ 0.84
Srsf1Q6PDM2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Srsf1Q6PDM2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srsf1Q6PDM2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Srsf1Q6PDM2 Gm9959-201ENSMUST00000068277 390 ntBASIC20.29■□□□□ 0.84
Srsf1Q6PDM2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Srsf1Q6PDM2 Gm45444-201ENSMUST00000211394 898 ntBASIC20.28■□□□□ 0.84
Srsf1Q6PDM2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Srsf1Q6PDM2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.28■□□□□ 0.84
Srsf1Q6PDM2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srsf1Q6PDM2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Srsf1Q6PDM2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srsf1Q6PDM2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srsf1Q6PDM2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Srsf1Q6PDM2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Srsf1Q6PDM2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srsf1Q6PDM2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Srsf1Q6PDM2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.25■□□□□ 0.83
Srsf1Q6PDM2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Srsf1Q6PDM2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Srsf1Q6PDM2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.24■□□□□ 0.83
Srsf1Q6PDM2 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.24■□□□□ 0.83
Srsf1Q6PDM2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Srsf1Q6PDM2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srsf1Q6PDM2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srsf1Q6PDM2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.23■□□□□ 0.83
Srsf1Q6PDM2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Srsf1Q6PDM2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Srsf1Q6PDM2 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.22■□□□□ 0.83
Srsf1Q6PDM2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Srsf1Q6PDM2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.21■□□□□ 0.83
Srsf1Q6PDM2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Srsf1Q6PDM2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Srsf1Q6PDM2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Srsf1Q6PDM2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.19■□□□□ 0.82
Srsf1Q6PDM2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Srsf1Q6PDM2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Srsf1Q6PDM2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Srsf1Q6PDM2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srsf1Q6PDM2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.18■□□□□ 0.82
Srsf1Q6PDM2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srsf1Q6PDM2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.18■□□□□ 0.82
Srsf1Q6PDM2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Srsf1Q6PDM2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srsf1Q6PDM2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srsf1Q6PDM2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Srsf1Q6PDM2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Srsf1Q6PDM2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srsf1Q6PDM2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srsf1Q6PDM2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Srsf1Q6PDM2 Terc-201ENSMUST00000082862 423 ntBASIC20.16■□□□□ 0.82
Srsf1Q6PDM2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Srsf1Q6PDM2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Srsf1Q6PDM2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srsf1Q6PDM2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srsf1Q6PDM2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Srsf1Q6PDM2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.14■□□□□ 0.81
Srsf1Q6PDM2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.14■□□□□ 0.81
Srsf1Q6PDM2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.14■□□□□ 0.81
Srsf1Q6PDM2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.14■□□□□ 0.81
Srsf1Q6PDM2 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.14■□□□□ 0.81
Srsf1Q6PDM2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.14■□□□□ 0.81
Srsf1Q6PDM2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.13■□□□□ 0.81
Srsf1Q6PDM2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Srsf1Q6PDM2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Srsf1Q6PDM2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Srsf1Q6PDM2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Srsf1Q6PDM2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srsf1Q6PDM2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srsf1Q6PDM2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Srsf1Q6PDM2 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms