Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Ubr3Q5U430 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
Ubr3Q5U430 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC29.21■■■□□ 2.27
Ubr3Q5U430 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Ubr3Q5U430 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Ubr3Q5U430 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Ubr3Q5U430 Terc-201ENSMUST00000082862 423 ntBASIC29.19■■■□□ 2.26
Ubr3Q5U430 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ubr3Q5U430 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ubr3Q5U430 AC153911.1-201ENSMUST00000220378 758 ntBASIC29.18■■■□□ 2.26
Ubr3Q5U430 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr3Q5U430 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ubr3Q5U430 Gm15546-201ENSMUST00000122095 826 ntBASIC29.17■■■□□ 2.26
Ubr3Q5U430 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Ubr3Q5U430 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Ubr3Q5U430 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Ubr3Q5U430 Gm14121-201ENSMUST00000121441 1380 ntBASIC29.15■■■□□ 2.26
Ubr3Q5U430 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ubr3Q5U430 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Ubr3Q5U430 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC29.14■■■□□ 2.26
Ubr3Q5U430 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ubr3Q5U430 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Ubr3Q5U430 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ubr3Q5U430 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.13■■■□□ 2.25
Ubr3Q5U430 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC29.12■■■□□ 2.25
Ubr3Q5U430 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ubr3Q5U430 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC29.12■■■□□ 2.25
Ubr3Q5U430 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ubr3Q5U430 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ubr3Q5U430 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC29.1■■■□□ 2.25
Ubr3Q5U430 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Ubr3Q5U430 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ubr3Q5U430 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Ubr3Q5U430 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Ubr3Q5U430 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Ubr3Q5U430 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Ubr3Q5U430 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
Ubr3Q5U430 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC29.06■■■□□ 2.24
Ubr3Q5U430 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC29.06■■■□□ 2.24
Ubr3Q5U430 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
Ubr3Q5U430 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Ubr3Q5U430 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Ubr3Q5U430 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ubr3Q5U430 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ubr3Q5U430 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Ubr3Q5U430 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Ubr3Q5U430 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Ubr3Q5U430 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Ubr3Q5U430 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ubr3Q5U430 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
Ubr3Q5U430 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Ubr3Q5U430 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC29.04■■■□□ 2.24
Ubr3Q5U430 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Ubr3Q5U430 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC29.02■■■□□ 2.24
Ubr3Q5U430 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29.02■■■□□ 2.24
Ubr3Q5U430 Gm43566-201ENSMUST00000196851 808 ntBASIC29.01■■■□□ 2.23
Ubr3Q5U430 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
Ubr3Q5U430 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
Ubr3Q5U430 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC29■■■□□ 2.23
Ubr3Q5U430 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ubr3Q5U430 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC29■■■□□ 2.23
Ubr3Q5U430 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Ubr3Q5U430 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ubr3Q5U430 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.99■■■□□ 2.23
Ubr3Q5U430 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ubr3Q5U430 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Ubr3Q5U430 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Ubr3Q5U430 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Ubr3Q5U430 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ubr3Q5U430 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.98■■■□□ 2.23
Ubr3Q5U430 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ubr3Q5U430 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ubr3Q5U430 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ubr3Q5U430 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.97■■■□□ 2.23
Ubr3Q5U430 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ubr3Q5U430 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.97■■■□□ 2.23
Ubr3Q5U430 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ubr3Q5U430 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.97■■■□□ 2.23
Ubr3Q5U430 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ubr3Q5U430 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Ubr3Q5U430 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
Ubr3Q5U430 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.95■■■□□ 2.23
Ubr3Q5U430 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.95■■■□□ 2.23
Ubr3Q5U430 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Ubr3Q5U430 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ubr3Q5U430 Gm13238-201ENSMUST00000117655 780 ntBASIC28.94■■■□□ 2.22
Ubr3Q5U430 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ubr3Q5U430 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.93■■■□□ 2.22
Ubr3Q5U430 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.93■■■□□ 2.22
Ubr3Q5U430 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
Ubr3Q5U430 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
Ubr3Q5U430 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Ubr3Q5U430 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ubr3Q5U430 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ubr3Q5U430 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ubr3Q5U430 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ubr3Q5U430 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ubr3Q5U430 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.9■■■□□ 2.22
Ubr3Q5U430 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ubr3Q5U430 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms