Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav2Q5R1I9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav2Q5R1I9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.27■□□□□ 0.51
Trav2Q5R1I9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav2Q5R1I9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav2Q5R1I9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.26■□□□□ 0.51
Trav2Q5R1I9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav2Q5R1I9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav2Q5R1I9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav2Q5R1I9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav2Q5R1I9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav2Q5R1I9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav2Q5R1I9 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.25■□□□□ 0.51
Trav2Q5R1I9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav2Q5R1I9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav2Q5R1I9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.24■□□□□ 0.51
Trav2Q5R1I9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trav2Q5R1I9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Cap2-205ENSMUST00000225824 1634 ntBASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trav2Q5R1I9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav2Q5R1I9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav2Q5R1I9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav2Q5R1I9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav2Q5R1I9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.21■□□□□ 0.51
Trav2Q5R1I9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav2Q5R1I9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.21■□□□□ 0.51
Trav2Q5R1I9 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.21■□□□□ 0.51
Trav2Q5R1I9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav2Q5R1I9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Trav2Q5R1I9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav2Q5R1I9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav2Q5R1I9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav2Q5R1I9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav2Q5R1I9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav2Q5R1I9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trav2Q5R1I9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trav2Q5R1I9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav2Q5R1I9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav2Q5R1I9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav2Q5R1I9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav2Q5R1I9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav2Q5R1I9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav2Q5R1I9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav2Q5R1I9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trav2Q5R1I9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav2Q5R1I9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav2Q5R1I9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav2Q5R1I9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.17■□□□□ 0.5
Trav2Q5R1I9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav2Q5R1I9 Terc-201ENSMUST00000082862 423 ntBASIC18.17■□□□□ 0.5
Trav2Q5R1I9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav2Q5R1I9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav2Q5R1I9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav2Q5R1I9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.16■□□□□ 0.5
Trav2Q5R1I9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav2Q5R1I9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav2Q5R1I9 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.15■□□□□ 0.5
Trav2Q5R1I9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav2Q5R1I9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trav2Q5R1I9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trav2Q5R1I9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav2Q5R1I9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav2Q5R1I9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav2Q5R1I9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav2Q5R1I9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav2Q5R1I9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav2Q5R1I9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.13■□□□□ 0.49
Trav2Q5R1I9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav2Q5R1I9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav2Q5R1I9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav2Q5R1I9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav2Q5R1I9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Gm12366-201ENSMUST00000121722 873 ntBASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Gm5786-201ENSMUST00000085368 882 ntBASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav2Q5R1I9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav2Q5R1I9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav2Q5R1I9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav2Q5R1I9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav2Q5R1I9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav2Q5R1I9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms