Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav6-2Q5R1I4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav6-2Q5R1I4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trav6-2Q5R1I4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6-2Q5R1I4 Gm14523-201ENSMUST00000117260 558 ntBASIC20.46■□□□□ 0.87
Trav6-2Q5R1I4 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.45■□□□□ 0.86
Trav6-2Q5R1I4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.44■□□□□ 0.86
Trav6-2Q5R1I4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav6-2Q5R1I4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav6-2Q5R1I4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav6-2Q5R1I4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav6-2Q5R1I4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6-2Q5R1I4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.43■□□□□ 0.86
Trav6-2Q5R1I4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6-2Q5R1I4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav6-2Q5R1I4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6-2Q5R1I4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6-2Q5R1I4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6-2Q5R1I4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Trav6-2Q5R1I4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.42■□□□□ 0.86
Trav6-2Q5R1I4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6-2Q5R1I4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.41■□□□□ 0.86
Trav6-2Q5R1I4 Terc-201ENSMUST00000082862 423 ntBASIC20.41■□□□□ 0.86
Trav6-2Q5R1I4 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.41■□□□□ 0.86
Trav6-2Q5R1I4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav6-2Q5R1I4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav6-2Q5R1I4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav6-2Q5R1I4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav6-2Q5R1I4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav6-2Q5R1I4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.39■□□□□ 0.85
Trav6-2Q5R1I4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav6-2Q5R1I4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6-2Q5R1I4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6-2Q5R1I4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-2Q5R1I4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trav6-2Q5R1I4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-2Q5R1I4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-2Q5R1I4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trav6-2Q5R1I4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-2Q5R1I4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.37■□□□□ 0.85
Trav6-2Q5R1I4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav6-2Q5R1I4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.36■□□□□ 0.85
Trav6-2Q5R1I4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav6-2Q5R1I4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav6-2Q5R1I4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.35■□□□□ 0.85
Trav6-2Q5R1I4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trav6-2Q5R1I4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6-2Q5R1I4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Trav6-2Q5R1I4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6-2Q5R1I4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.34■□□□□ 0.85
Trav6-2Q5R1I4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6-2Q5R1I4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav6-2Q5R1I4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6-2Q5R1I4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav6-2Q5R1I4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Trav6-2Q5R1I4 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.33■□□□□ 0.85
Trav6-2Q5R1I4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.33■□□□□ 0.85
Trav6-2Q5R1I4 Amer2-203ENSMUST00000225247 2662 ntBASIC20.32■□□□□ 0.84
Trav6-2Q5R1I4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav6-2Q5R1I4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.32■□□□□ 0.84
Trav6-2Q5R1I4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav6-2Q5R1I4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.31■□□□□ 0.84
Trav6-2Q5R1I4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trav6-2Q5R1I4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-2Q5R1I4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.31■□□□□ 0.84
Trav6-2Q5R1I4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.31■□□□□ 0.84
Trav6-2Q5R1I4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-2Q5R1I4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6-2Q5R1I4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6-2Q5R1I4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.3■□□□□ 0.84
Trav6-2Q5R1I4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav6-2Q5R1I4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6-2Q5R1I4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav6-2Q5R1I4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.29■□□□□ 0.84
Trav6-2Q5R1I4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.28■□□□□ 0.84
Trav6-2Q5R1I4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trav6-2Q5R1I4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav6-2Q5R1I4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6-2Q5R1I4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trav6-2Q5R1I4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6-2Q5R1I4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6-2Q5R1I4 Gm10420-201ENSMUST00000121713 882 ntBASIC20.27■□□□□ 0.84
Trav6-2Q5R1I4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.27■□□□□ 0.84
Trav6-2Q5R1I4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6-2Q5R1I4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Trav6-2Q5R1I4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav6-2Q5R1I4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav6-2Q5R1I4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Trav6-2Q5R1I4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-2Q5R1I4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-2Q5R1I4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-2Q5R1I4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-2Q5R1I4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav6-2Q5R1I4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trav6-2Q5R1I4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6-2Q5R1I4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trav6-2Q5R1I4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-2Q5R1I4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-2Q5R1I4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav6-2Q5R1I4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms