Protein–RNA interactions for Protein: Q3UWQ3

Ube2fb, NEDD8-conjugating enzyme UBE2F-B, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fbQ3UWQ3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ube2fbQ3UWQ3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ube2fbQ3UWQ3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ube2fbQ3UWQ3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ube2fbQ3UWQ3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ube2fbQ3UWQ3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ube2fbQ3UWQ3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ube2fbQ3UWQ3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ube2fbQ3UWQ3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ube2fbQ3UWQ3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ube2fbQ3UWQ3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.31■■□□□ 1
Ube2fbQ3UWQ3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ube2fbQ3UWQ3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ube2fbQ3UWQ3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Ube2fbQ3UWQ3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ube2fbQ3UWQ3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ube2fbQ3UWQ3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ube2fbQ3UWQ3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ube2fbQ3UWQ3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ube2fbQ3UWQ3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ube2fbQ3UWQ3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ube2fbQ3UWQ3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ube2fbQ3UWQ3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ube2fbQ3UWQ3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ube2fbQ3UWQ3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Ube2fbQ3UWQ3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ube2fbQ3UWQ3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Ube2fbQ3UWQ3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube2fbQ3UWQ3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube2fbQ3UWQ3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.26■□□□□ 0.99
Ube2fbQ3UWQ3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ube2fbQ3UWQ3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.26■□□□□ 0.99
Ube2fbQ3UWQ3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.25■□□□□ 0.99
Ube2fbQ3UWQ3 Gm45364-201ENSMUST00000210883 159 ntBASIC21.25■□□□□ 0.99
Ube2fbQ3UWQ3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube2fbQ3UWQ3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ube2fbQ3UWQ3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube2fbQ3UWQ3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube2fbQ3UWQ3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube2fbQ3UWQ3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ube2fbQ3UWQ3 Gm7332-201ENSMUST00000118351 454 ntBASIC21.23■□□□□ 0.99
Ube2fbQ3UWQ3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ube2fbQ3UWQ3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ube2fbQ3UWQ3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ube2fbQ3UWQ3 Gm27502-201ENSMUST00000183495 199 ntBASIC21.21■□□□□ 0.99
Ube2fbQ3UWQ3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.21■□□□□ 0.99
Ube2fbQ3UWQ3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ube2fbQ3UWQ3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ube2fbQ3UWQ3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ube2fbQ3UWQ3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Ube2fbQ3UWQ3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.2■□□□□ 0.98
Ube2fbQ3UWQ3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube2fbQ3UWQ3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ube2fbQ3UWQ3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ube2fbQ3UWQ3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.19■□□□□ 0.98
Ube2fbQ3UWQ3 Gm37136-201ENSMUST00000194368 194 ntBASIC21.19■□□□□ 0.98
Ube2fbQ3UWQ3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ube2fbQ3UWQ3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.18■□□□□ 0.98
Ube2fbQ3UWQ3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.18■□□□□ 0.98
Ube2fbQ3UWQ3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ube2fbQ3UWQ3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ube2fbQ3UWQ3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube2fbQ3UWQ3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube2fbQ3UWQ3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ube2fbQ3UWQ3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ube2fbQ3UWQ3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube2fbQ3UWQ3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube2fbQ3UWQ3 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.16■□□□□ 0.98
Ube2fbQ3UWQ3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.16■□□□□ 0.98
Ube2fbQ3UWQ3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ube2fbQ3UWQ3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube2fbQ3UWQ3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.15■□□□□ 0.98
Ube2fbQ3UWQ3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube2fbQ3UWQ3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube2fbQ3UWQ3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.14■□□□□ 0.98
Ube2fbQ3UWQ3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Ube2fbQ3UWQ3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube2fbQ3UWQ3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ube2fbQ3UWQ3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube2fbQ3UWQ3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ube2fbQ3UWQ3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.13■□□□□ 0.97
Ube2fbQ3UWQ3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ube2fbQ3UWQ3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Ube2fbQ3UWQ3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube2fbQ3UWQ3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ube2fbQ3UWQ3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube2fbQ3UWQ3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ube2fbQ3UWQ3 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.11■□□□□ 0.97
Ube2fbQ3UWQ3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube2fbQ3UWQ3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.1■□□□□ 0.97
Ube2fbQ3UWQ3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube2fbQ3UWQ3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube2fbQ3UWQ3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube2fbQ3UWQ3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ube2fbQ3UWQ3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube2fbQ3UWQ3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ube2fbQ3UWQ3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube2fbQ3UWQ3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ube2fbQ3UWQ3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ube2fbQ3UWQ3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms