Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cdkl5Q3UTQ8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Cdkl5Q3UTQ8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cdkl5Q3UTQ8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cdkl5Q3UTQ8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.64■■□□□ 1.85
Cdkl5Q3UTQ8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cdkl5Q3UTQ8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cdkl5Q3UTQ8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Cdkl5Q3UTQ8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cdkl5Q3UTQ8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cdkl5Q3UTQ8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cdkl5Q3UTQ8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.6■■□□□ 1.85
Cdkl5Q3UTQ8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cdkl5Q3UTQ8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cdkl5Q3UTQ8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cdkl5Q3UTQ8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.57■■□□□ 1.84
Cdkl5Q3UTQ8 Gm11599-201ENSMUST00000118720 878 ntBASIC26.57■■□□□ 1.84
Cdkl5Q3UTQ8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cdkl5Q3UTQ8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cdkl5Q3UTQ8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cdkl5Q3UTQ8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cdkl5Q3UTQ8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cdkl5Q3UTQ8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.54■■□□□ 1.84
Cdkl5Q3UTQ8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cdkl5Q3UTQ8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Cdkl5Q3UTQ8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cdkl5Q3UTQ8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cdkl5Q3UTQ8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cdkl5Q3UTQ8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cdkl5Q3UTQ8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cdkl5Q3UTQ8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cdkl5Q3UTQ8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Cdkl5Q3UTQ8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cdkl5Q3UTQ8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cdkl5Q3UTQ8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Gm4799-201ENSMUST00000095396 657 ntBASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cdkl5Q3UTQ8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cdkl5Q3UTQ8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.48■■□□□ 1.83
Cdkl5Q3UTQ8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Cdkl5Q3UTQ8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Cdkl5Q3UTQ8 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.46■■□□□ 1.83
Cdkl5Q3UTQ8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.46■■□□□ 1.83
Cdkl5Q3UTQ8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Cdkl5Q3UTQ8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Cdkl5Q3UTQ8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.82
Cdkl5Q3UTQ8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.45■■□□□ 1.82
Cdkl5Q3UTQ8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cdkl5Q3UTQ8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Cdkl5Q3UTQ8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.44■■□□□ 1.82
Cdkl5Q3UTQ8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Cdkl5Q3UTQ8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Cdkl5Q3UTQ8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cdkl5Q3UTQ8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cdkl5Q3UTQ8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cdkl5Q3UTQ8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cdkl5Q3UTQ8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Cdkl5Q3UTQ8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cdkl5Q3UTQ8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Cdkl5Q3UTQ8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cdkl5Q3UTQ8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Cdkl5Q3UTQ8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cdkl5Q3UTQ8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cdkl5Q3UTQ8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cdkl5Q3UTQ8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cdkl5Q3UTQ8 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.36■■□□□ 1.81
Cdkl5Q3UTQ8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Cdkl5Q3UTQ8 Mir3960-201ENSMUST00000198213 73 ntBASIC26.35■■□□□ 1.81
Cdkl5Q3UTQ8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cdkl5Q3UTQ8 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.34■■□□□ 1.81
Cdkl5Q3UTQ8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cdkl5Q3UTQ8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cdkl5Q3UTQ8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms