Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SgcdP82347 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SgcdP82347 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SgcdP82347 Gm6821-201ENSMUST00000107540 542 ntBASIC21.05■□□□□ 0.96
SgcdP82347 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.05■□□□□ 0.96
SgcdP82347 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SgcdP82347 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SgcdP82347 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SgcdP82347 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SgcdP82347 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.03■□□□□ 0.96
SgcdP82347 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcdP82347 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.03■□□□□ 0.96
SgcdP82347 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SgcdP82347 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcdP82347 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcdP82347 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SgcdP82347 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SgcdP82347 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SgcdP82347 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SgcdP82347 Gm8503-201ENSMUST00000118131 455 ntBASIC21.02■□□□□ 0.96
SgcdP82347 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SgcdP82347 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SgcdP82347 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SgcdP82347 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SgcdP82347 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SgcdP82347 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SgcdP82347 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.01■□□□□ 0.95
SgcdP82347 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SgcdP82347 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
SgcdP82347 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SgcdP82347 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgcdP82347 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgcdP82347 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgcdP82347 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgcdP82347 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SgcdP82347 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SgcdP82347 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SgcdP82347 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SgcdP82347 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SgcdP82347 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.97■□□□□ 0.95
SgcdP82347 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SgcdP82347 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SgcdP82347 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SgcdP82347 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SgcdP82347 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SgcdP82347 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SgcdP82347 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SgcdP82347 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SgcdP82347 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SgcdP82347 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SgcdP82347 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SgcdP82347 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SgcdP82347 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SgcdP82347 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SgcdP82347 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SgcdP82347 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SgcdP82347 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SgcdP82347 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SgcdP82347 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SgcdP82347 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SgcdP82347 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SgcdP82347 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SgcdP82347 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SgcdP82347 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SgcdP82347 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SgcdP82347 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.93■□□□□ 0.94
SgcdP82347 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SgcdP82347 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SgcdP82347 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SgcdP82347 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SgcdP82347 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SgcdP82347 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SgcdP82347 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SgcdP82347 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SgcdP82347 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.9■□□□□ 0.94
SgcdP82347 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SgcdP82347 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
SgcdP82347 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SgcdP82347 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SgcdP82347 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SgcdP82347 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SgcdP82347 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SgcdP82347 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SgcdP82347 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SgcdP82347 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SgcdP82347 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgcdP82347 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgcdP82347 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgcdP82347 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgcdP82347 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SgcdP82347 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SgcdP82347 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
SgcdP82347 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SgcdP82347 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SgcdP82347 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SgcdP82347 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SgcdP82347 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SgcdP82347 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SgcdP82347 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SgcdP82347 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms