Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
Cux2P70298 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Cux2P70298 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC39.51■■■■□ 3.92
Cux2P70298 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Cux2P70298 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC39.5■■■■□ 3.91
Cux2P70298 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC39.5■■■■□ 3.91
Cux2P70298 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC39.5■■■■□ 3.91
Cux2P70298 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC39.49■■■■□ 3.91
Cux2P70298 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
Cux2P70298 Gm13238-201ENSMUST00000117655 780 ntBASIC39.48■■■■□ 3.91
Cux2P70298 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
Cux2P70298 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC39.46■■■■□ 3.91
Cux2P70298 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC39.45■■■■□ 3.91
Cux2P70298 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
Cux2P70298 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC39.44■■■■□ 3.9
Cux2P70298 AC153911.1-201ENSMUST00000220378 758 ntBASIC39.44■■■■□ 3.9
Cux2P70298 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC39.43■■■■□ 3.9
Cux2P70298 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Cux2P70298 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC39.42■■■■□ 3.9
Cux2P70298 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC39.42■■■■□ 3.9
Cux2P70298 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC39.41■■■■□ 3.9
Cux2P70298 Gm15820-201ENSMUST00000201566 728 ntBASIC39.41■■■■□ 3.9
Cux2P70298 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC39.4■■■■□ 3.9
Cux2P70298 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
Cux2P70298 Gm43566-201ENSMUST00000196851 808 ntBASIC39.4■■■■□ 3.9
Cux2P70298 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC39.39■■■■□ 3.9
Cux2P70298 Terc-201ENSMUST00000082862 423 ntBASIC39.39■■■■□ 3.9
Cux2P70298 Gm45102-201ENSMUST00000207427 857 ntBASIC39.38■■■■□ 3.89
Cux2P70298 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC39.37■■■■□ 3.89
Cux2P70298 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
Cux2P70298 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
Cux2P70298 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC39.34■■■■□ 3.89
Cux2P70298 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC39.34■■■■□ 3.89
Cux2P70298 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
Cux2P70298 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
Cux2P70298 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC39.33■■■■□ 3.89
Cux2P70298 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC39.32■■■■□ 3.89
Cux2P70298 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
Cux2P70298 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
Cux2P70298 Gm14117-201ENSMUST00000122417 843 ntBASIC39.29■■■■□ 3.88
Cux2P70298 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC39.29■■■■□ 3.88
Cux2P70298 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
Cux2P70298 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC39.28■■■■□ 3.88
Cux2P70298 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC39.26■■■■□ 3.88
Cux2P70298 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC39.26■■■■□ 3.88
Cux2P70298 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Cux2P70298 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.87
Cux2P70298 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC39.25■■■■□ 3.87
Cux2P70298 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC39.25■■■■□ 3.87
Cux2P70298 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
Cux2P70298 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC39.25■■■■□ 3.87
Cux2P70298 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
Cux2P70298 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Cux2P70298 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
Cux2P70298 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Cux2P70298 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC39.22■■■■□ 3.87
Cux2P70298 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC39.22■■■■□ 3.87
Cux2P70298 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC39.22■■■■□ 3.87
Cux2P70298 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC39.21■■■■□ 3.87
Cux2P70298 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Cux2P70298 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC39.2■■■■□ 3.87
Cux2P70298 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC39.2■■■■□ 3.87
Cux2P70298 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Cux2P70298 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC39.19■■■■□ 3.86
Cux2P70298 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
Cux2P70298 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC39.19■■■■□ 3.86
Cux2P70298 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC39.18■■■■□ 3.86
Cux2P70298 Nsd1-203ENSMUST00000224156 1149 ntBASIC39.18■■■■□ 3.86
Cux2P70298 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
Cux2P70298 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC39.17■■■■□ 3.86
Cux2P70298 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC39.16■■■■□ 3.86
Cux2P70298 Gm45444-201ENSMUST00000211394 898 ntBASIC39.16■■■■□ 3.86
Cux2P70298 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC39.15■■■■□ 3.86
Cux2P70298 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC39.15■■■■□ 3.86
Cux2P70298 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC39.15■■■■□ 3.86
Cux2P70298 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
Cux2P70298 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC39.13■■■■□ 3.86
Cux2P70298 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
Cux2P70298 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC39.12■■■■□ 3.85
Cux2P70298 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
Cux2P70298 Gm43592-201ENSMUST00000196922 1165 ntBASIC39.11■■■■□ 3.85
Cux2P70298 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
Cux2P70298 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC39.1■■■■□ 3.85
Cux2P70298 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC39.1■■■■□ 3.85
Cux2P70298 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC39.09■■■■□ 3.85
Cux2P70298 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
Cux2P70298 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
Cux2P70298 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC39.09■■■■□ 3.85
Cux2P70298 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC39.08■■■■□ 3.85
Cux2P70298 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Cux2P70298 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
Cux2P70298 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Cux2P70298 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC39.07■■■■□ 3.85
Cux2P70298 Gm44428-201ENSMUST00000204474 874 ntBASIC39.07■■■■□ 3.85
Cux2P70298 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
Cux2P70298 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC39.07■■■■□ 3.84
Cux2P70298 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Cux2P70298 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Cux2P70298 Gm9959-201ENSMUST00000068277 390 ntBASIC39.05■■■■□ 3.84
Cux2P70298 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms