Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim4P70271 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.93■□□□□ 0.62
Pdlim4P70271 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim4P70271 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.93■□□□□ 0.62
Pdlim4P70271 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim4P70271 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pdlim4P70271 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pdlim4P70271 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.91■□□□□ 0.62
Pdlim4P70271 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim4P70271 Gm4799-201ENSMUST00000095396 657 ntBASIC18.91■□□□□ 0.62
Pdlim4P70271 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim4P70271 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pdlim4P70271 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim4P70271 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pdlim4P70271 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pdlim4P70271 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim4P70271 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.9■□□□□ 0.62
Pdlim4P70271 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pdlim4P70271 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pdlim4P70271 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pdlim4P70271 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.89■□□□□ 0.62
Pdlim4P70271 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pdlim4P70271 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim4P70271 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim4P70271 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim4P70271 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pdlim4P70271 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pdlim4P70271 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.88■□□□□ 0.61
Pdlim4P70271 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.88■□□□□ 0.61
Pdlim4P70271 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.88■□□□□ 0.61
Pdlim4P70271 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Pdlim4P70271 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pdlim4P70271 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim4P70271 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim4P70271 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pdlim4P70271 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim4P70271 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim4P70271 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim4P70271 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim4P70271 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.86■□□□□ 0.61
Pdlim4P70271 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim4P70271 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim4P70271 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim4P70271 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pdlim4P70271 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim4P70271 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim4P70271 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pdlim4P70271 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pdlim4P70271 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim4P70271 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim4P70271 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdlim4P70271 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim4P70271 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Pdlim4P70271 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pdlim4P70271 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim4P70271 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim4P70271 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim4P70271 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdlim4P70271 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdlim4P70271 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.83■□□□□ 0.6
Pdlim4P70271 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pdlim4P70271 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim4P70271 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pdlim4P70271 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdlim4P70271 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim4P70271 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim4P70271 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.82■□□□□ 0.6
Pdlim4P70271 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdlim4P70271 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim4P70271 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pdlim4P70271 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim4P70271 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdlim4P70271 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim4P70271 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim4P70271 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim4P70271 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.8■□□□□ 0.6
Pdlim4P70271 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim4P70271 Gm6311-201ENSMUST00000073790 878 ntBASIC18.8■□□□□ 0.6
Pdlim4P70271 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim4P70271 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdlim4P70271 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.8■□□□□ 0.6
Pdlim4P70271 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pdlim4P70271 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim4P70271 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Pdlim4P70271 Mir3960-201ENSMUST00000198213 73 ntBASIC18.79■□□□□ 0.6
Pdlim4P70271 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim4P70271 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdlim4P70271 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pdlim4P70271 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim4P70271 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.78■□□□□ 0.6
Pdlim4P70271 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.78■□□□□ 0.6
Pdlim4P70271 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim4P70271 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim4P70271 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim4P70271 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdlim4P70271 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.78■□□□□ 0.6
Pdlim4P70271 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim4P70271 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim4P70271 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdlim4P70271 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms