Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h3aP68433 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3aP68433 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3aP68433 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3aP68433 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3aP68433 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h3aP68433 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h3aP68433 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h3aP68433 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h3aP68433 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hist1h3aP68433 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h3aP68433 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hist1h3aP68433 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hist1h3aP68433 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h3aP68433 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h3aP68433 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h3aP68433 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20■□□□□ 0.79
Hist1h3aP68433 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h3aP68433 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h3aP68433 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hist1h3aP68433 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h3aP68433 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h3aP68433 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hist1h3aP68433 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h3aP68433 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist1h3aP68433 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3aP68433 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3aP68433 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3aP68433 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3aP68433 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3aP68433 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3aP68433 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3aP68433 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h3aP68433 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hist1h3aP68433 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.96■□□□□ 0.79
Hist1h3aP68433 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.96■□□□□ 0.79
Hist1h3aP68433 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hist1h3aP68433 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hist1h3aP68433 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hist1h3aP68433 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hist1h3aP68433 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.94■□□□□ 0.78
Hist1h3aP68433 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hist1h3aP68433 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hist1h3aP68433 Gm7432-201ENSMUST00000210343 879 ntBASIC19.94■□□□□ 0.78
Hist1h3aP68433 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hist1h3aP68433 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hist1h3aP68433 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hist1h3aP68433 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hist1h3aP68433 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hist1h3aP68433 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h3aP68433 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.92■□□□□ 0.78
Hist1h3aP68433 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hist1h3aP68433 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hist1h3aP68433 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hist1h3aP68433 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hist1h3aP68433 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.91■□□□□ 0.78
Hist1h3aP68433 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hist1h3aP68433 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hist1h3aP68433 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hist1h3aP68433 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.89■□□□□ 0.77
Hist1h3aP68433 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hist1h3aP68433 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hist1h3aP68433 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hist1h3aP68433 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hist1h3aP68433 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h3aP68433 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h3aP68433 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.88■□□□□ 0.77
Hist1h3aP68433 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hist1h3aP68433 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h3aP68433 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h3aP68433 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hist1h3aP68433 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hist1h3aP68433 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hist1h3aP68433 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hist1h3aP68433 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hist1h3aP68433 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3aP68433 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.86■□□□□ 0.77
Hist1h3aP68433 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.86■□□□□ 0.77
Hist1h3aP68433 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3aP68433 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3aP68433 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3aP68433 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hist1h3aP68433 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hist1h3aP68433 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hist1h3aP68433 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hist1h3aP68433 Gm11599-201ENSMUST00000118720 878 ntBASIC19.85■□□□□ 0.77
Hist1h3aP68433 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h3aP68433 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h3aP68433 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h3aP68433 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hist1h3aP68433 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hist1h3aP68433 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hist1h3aP68433 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hist1h3aP68433 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.83■□□□□ 0.77
Hist1h3aP68433 Gm4799-201ENSMUST00000095396 657 ntBASIC19.83■□□□□ 0.77
Hist1h3aP68433 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hist1h3aP68433 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hist1h3aP68433 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hist1h3aP68433 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hist1h3aP68433 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms