Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm9397-201ENSMUST00000200125 605 ntBASIC18.95■□□□□ 0.62
Hmx3P42581 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmx3P42581 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Hmx3P42581 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmx3P42581 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmx3P42581 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmx3P42581 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hmx3P42581 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Hmx3P42581 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmx3P42581 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmx3P42581 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Hmx3P42581 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmx3P42581 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hmx3P42581 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmx3P42581 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hmx3P42581 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmx3P42581 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.93■□□□□ 0.62
Hmx3P42581 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Hmx3P42581 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Hmx3P42581 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmx3P42581 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
Hmx3P42581 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmx3P42581 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmx3P42581 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmx3P42581 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmx3P42581 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmx3P42581 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmx3P42581 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmx3P42581 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hmx3P42581 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.91■□□□□ 0.62
Hmx3P42581 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmx3P42581 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmx3P42581 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.91■□□□□ 0.62
Hmx3P42581 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmx3P42581 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Hmx3P42581 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmx3P42581 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmx3P42581 Gm45855-201ENSMUST00000212546 880 ntBASIC18.9■□□□□ 0.62
Hmx3P42581 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.9■□□□□ 0.62
Hmx3P42581 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmx3P42581 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmx3P42581 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmx3P42581 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmx3P42581 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.89■□□□□ 0.61
Hmx3P42581 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmx3P42581 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Hmx3P42581 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmx3P42581 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmx3P42581 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmx3P42581 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmx3P42581 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmx3P42581 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Hmx3P42581 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.87■□□□□ 0.61
Hmx3P42581 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmx3P42581 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmx3P42581 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hmx3P42581 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hmx3P42581 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.86■□□□□ 0.61
Hmx3P42581 Gm24970-201ENSMUST00000175582 82 ntBASIC18.86■□□□□ 0.61
Hmx3P42581 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.86■□□□□ 0.61
Hmx3P42581 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hmx3P42581 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Hmx3P42581 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmx3P42581 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Hmx3P42581 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hmx3P42581 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmx3P42581 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmx3P42581 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.84■□□□□ 0.61
Hmx3P42581 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmx3P42581 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmx3P42581 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmx3P42581 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmx3P42581 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hmx3P42581 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hmx3P42581 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmx3P42581 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Hmx3P42581 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hmx3P42581 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmx3P42581 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmx3P42581 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.82■□□□□ 0.6
Hmx3P42581 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmx3P42581 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmx3P42581 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hmx3P42581 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmx3P42581 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.8■□□□□ 0.6
Hmx3P42581 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmx3P42581 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmx3P42581 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmx3P42581 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmx3P42581 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmx3P42581 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmx3P42581 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmx3P42581 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.78■□□□□ 0.6
Hmx3P42581 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hmx3P42581 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hmx3P42581 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmx3P42581 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmx3P42581 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Hmx3P42581 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmx3P42581 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 1985.2 ms