Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RxrbP28704 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RxrbP28704 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RxrbP28704 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RxrbP28704 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RxrbP28704 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.24■■□□□ 1.31
RxrbP28704 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.24■■□□□ 1.31
RxrbP28704 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.24■■□□□ 1.31
RxrbP28704 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RxrbP28704 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.23■■□□□ 1.31
RxrbP28704 Particl-201ENSMUST00000205370 1560 ntBASIC23.23■■□□□ 1.31
RxrbP28704 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RxrbP28704 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.23■■□□□ 1.31
RxrbP28704 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RxrbP28704 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.22■■□□□ 1.31
RxrbP28704 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.22■■□□□ 1.31
RxrbP28704 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RxrbP28704 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RxrbP28704 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
RxrbP28704 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RxrbP28704 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RxrbP28704 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RxrbP28704 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RxrbP28704 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RxrbP28704 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RxrbP28704 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.2■■□□□ 1.3
RxrbP28704 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.2■■□□□ 1.3
RxrbP28704 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RxrbP28704 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RxrbP28704 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RxrbP28704 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RxrbP28704 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.18■■□□□ 1.3
RxrbP28704 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RxrbP28704 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RxrbP28704 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
RxrbP28704 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RxrbP28704 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RxrbP28704 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.17■■□□□ 1.3
RxrbP28704 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RxrbP28704 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RxrbP28704 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RxrbP28704 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RxrbP28704 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
RxrbP28704 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RxrbP28704 Gm24970-201ENSMUST00000175582 82 ntBASIC23.16■■□□□ 1.3
RxrbP28704 Gm9397-201ENSMUST00000200125 605 ntBASIC23.16■■□□□ 1.3
RxrbP28704 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RxrbP28704 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RxrbP28704 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RxrbP28704 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.15■■□□□ 1.3
RxrbP28704 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RxrbP28704 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
RxrbP28704 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
RxrbP28704 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RxrbP28704 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RxrbP28704 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RxrbP28704 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.13■■□□□ 1.29
RxrbP28704 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RxrbP28704 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.13■■□□□ 1.29
RxrbP28704 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RxrbP28704 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RxrbP28704 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.13■■□□□ 1.29
RxrbP28704 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RxrbP28704 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RxrbP28704 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RxrbP28704 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RxrbP28704 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RxrbP28704 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RxrbP28704 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
RxrbP28704 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RxrbP28704 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.11■■□□□ 1.29
RxrbP28704 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.11■■□□□ 1.29
RxrbP28704 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.11■■□□□ 1.29
RxrbP28704 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RxrbP28704 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RxrbP28704 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RxrbP28704 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RxrbP28704 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RxrbP28704 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RxrbP28704 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RxrbP28704 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.09■■□□□ 1.29
RxrbP28704 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RxrbP28704 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RxrbP28704 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RxrbP28704 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RxrbP28704 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RxrbP28704 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.08■■□□□ 1.29
RxrbP28704 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
RxrbP28704 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
RxrbP28704 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RxrbP28704 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
RxrbP28704 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RxrbP28704 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RxrbP28704 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RxrbP28704 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RxrbP28704 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RxrbP28704 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RxrbP28704 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RxrbP28704 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RxrbP28704 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms