Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PtcraP0C6B2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.98■□□□□ 0.79
PtcraP0C6B2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.98■□□□□ 0.79
PtcraP0C6B2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.98■□□□□ 0.79
PtcraP0C6B2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PtcraP0C6B2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PtcraP0C6B2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PtcraP0C6B2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
PtcraP0C6B2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PtcraP0C6B2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PtcraP0C6B2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PtcraP0C6B2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.97■□□□□ 0.79
PtcraP0C6B2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PtcraP0C6B2 Gm4799-201ENSMUST00000095396 657 ntBASIC19.97■□□□□ 0.79
PtcraP0C6B2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PtcraP0C6B2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PtcraP0C6B2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PtcraP0C6B2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PtcraP0C6B2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PtcraP0C6B2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PtcraP0C6B2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PtcraP0C6B2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PtcraP0C6B2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PtcraP0C6B2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PtcraP0C6B2 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.94■□□□□ 0.78
PtcraP0C6B2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.94■□□□□ 0.78
PtcraP0C6B2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PtcraP0C6B2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PtcraP0C6B2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.93■□□□□ 0.78
PtcraP0C6B2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PtcraP0C6B2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PtcraP0C6B2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PtcraP0C6B2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PtcraP0C6B2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PtcraP0C6B2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PtcraP0C6B2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PtcraP0C6B2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.9■□□□□ 0.78
PtcraP0C6B2 Gm9812-201ENSMUST00000061934 968 ntBASIC19.9■□□□□ 0.78
PtcraP0C6B2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PtcraP0C6B2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PtcraP0C6B2 Mir3960-201ENSMUST00000198213 73 ntBASIC19.89■□□□□ 0.77
PtcraP0C6B2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PtcraP0C6B2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PtcraP0C6B2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.88■□□□□ 0.77
PtcraP0C6B2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PtcraP0C6B2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PtcraP0C6B2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PtcraP0C6B2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PtcraP0C6B2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
PtcraP0C6B2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PtcraP0C6B2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PtcraP0C6B2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PtcraP0C6B2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PtcraP0C6B2 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.86■□□□□ 0.77
PtcraP0C6B2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PtcraP0C6B2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.86■□□□□ 0.77
PtcraP0C6B2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PtcraP0C6B2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PtcraP0C6B2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PtcraP0C6B2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.85■□□□□ 0.77
PtcraP0C6B2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PtcraP0C6B2 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.85■□□□□ 0.77
PtcraP0C6B2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PtcraP0C6B2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PtcraP0C6B2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PtcraP0C6B2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PtcraP0C6B2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PtcraP0C6B2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PtcraP0C6B2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.84■□□□□ 0.77
PtcraP0C6B2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.84■□□□□ 0.77
PtcraP0C6B2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PtcraP0C6B2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PtcraP0C6B2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PtcraP0C6B2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.83■□□□□ 0.77
PtcraP0C6B2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PtcraP0C6B2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PtcraP0C6B2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PtcraP0C6B2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PtcraP0C6B2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PtcraP0C6B2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PtcraP0C6B2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PtcraP0C6B2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PtcraP0C6B2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PtcraP0C6B2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PtcraP0C6B2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PtcraP0C6B2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtcraP0C6B2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtcraP0C6B2 Gm45364-201ENSMUST00000210883 159 ntBASIC19.8■□□□□ 0.76
PtcraP0C6B2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtcraP0C6B2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtcraP0C6B2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.79■□□□□ 0.76
PtcraP0C6B2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PtcraP0C6B2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtcraP0C6B2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtcraP0C6B2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtcraP0C6B2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtcraP0C6B2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtcraP0C6B2 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.78■□□□□ 0.76
PtcraP0C6B2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.78■□□□□ 0.76
PtcraP0C6B2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms