Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P06328 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.77■□□□□ 0.28
P06328 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P06328 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P06328 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P06328 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
P06328 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P06328 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P06328 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P06328 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P06328 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
P06328 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
P06328 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.75■□□□□ 0.27
P06328 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P06328 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
P06328 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
P06328 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
P06328 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P06328 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
P06328 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
P06328 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.74■□□□□ 0.27
P06328 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
P06328 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P06328 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06328 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06328 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P06328 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
P06328 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06328 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06328 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06328 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P06328 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06328 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.71■□□□□ 0.27
P06328 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
P06328 Nkain2-201ENSMUST00000092602 558 ntBASIC16.71■□□□□ 0.27
P06328 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.71■□□□□ 0.27
P06328 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.71■□□□□ 0.27
P06328 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06328 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
P06328 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06328 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
P06328 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06328 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P06328 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06328 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06328 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06328 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P06328 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06328 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06328 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06328 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06328 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06328 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P06328 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06328 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
P06328 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P06328 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P06328 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06328 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06328 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P06328 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.68■□□□□ 0.26
P06328 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P06328 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06328 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06328 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06328 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P06328 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06328 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
P06328 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.65■□□□□ 0.26
P06328 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.65■□□□□ 0.26
P06328 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P06328 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
P06328 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.64■□□□□ 0.25
P06328 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P06328 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
P06328 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P06328 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06328 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.63■□□□□ 0.25
P06328 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.63■□□□□ 0.25
P06328 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.63■□□□□ 0.25
P06328 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P06328 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
P06328 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
P06328 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.62■□□□□ 0.25
P06328 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.62■□□□□ 0.25
P06328 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
P06328 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P06328 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.61■□□□□ 0.25
P06328 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P06328 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.6■□□□□ 0.25
P06328 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P06328 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.6■□□□□ 0.25
P06328 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
P06328 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P06328 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P06328 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06328 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06328 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06328 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P06328 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms