Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TcraP01849 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TcraP01849 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TcraP01849 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TcraP01849 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TcraP01849 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TcraP01849 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TcraP01849 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TcraP01849 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TcraP01849 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TcraP01849 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TcraP01849 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TcraP01849 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TcraP01849 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TcraP01849 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TcraP01849 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TcraP01849 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TcraP01849 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TcraP01849 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TcraP01849 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TcraP01849 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TcraP01849 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TcraP01849 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TcraP01849 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TcraP01849 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TcraP01849 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.62■□□□□ 0.25
TcraP01849 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TcraP01849 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TcraP01849 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TcraP01849 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TcraP01849 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TcraP01849 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TcraP01849 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TcraP01849 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.61■□□□□ 0.25
TcraP01849 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.61■□□□□ 0.25
TcraP01849 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TcraP01849 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TcraP01849 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TcraP01849 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TcraP01849 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TcraP01849 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TcraP01849 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TcraP01849 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TcraP01849 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TcraP01849 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TcraP01849 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TcraP01849 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TcraP01849 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.59■□□□□ 0.25
TcraP01849 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.59■□□□□ 0.25
TcraP01849 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TcraP01849 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.59■□□□□ 0.25
TcraP01849 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TcraP01849 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TcraP01849 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TcraP01849 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TcraP01849 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TcraP01849 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TcraP01849 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TcraP01849 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TcraP01849 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TcraP01849 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TcraP01849 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TcraP01849 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TcraP01849 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TcraP01849 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TcraP01849 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TcraP01849 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TcraP01849 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TcraP01849 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TcraP01849 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TcraP01849 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TcraP01849 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TcraP01849 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TcraP01849 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TcraP01849 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TcraP01849 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TcraP01849 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TcraP01849 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TcraP01849 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TcraP01849 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TcraP01849 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TcraP01849 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TcraP01849 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TcraP01849 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TcraP01849 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TcraP01849 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TcraP01849 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TcraP01849 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TcraP01849 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.53■□□□□ 0.24
TcraP01849 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TcraP01849 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TcraP01849 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TcraP01849 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TcraP01849 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TcraP01849 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TcraP01849 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TcraP01849 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TcraP01849 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TcraP01849 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TcraP01849 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms