Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
P01800 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
P01800 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
P01800 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
P01800 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
P01800 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
P01800 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01800 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
P01800 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01800 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
P01800 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P01800 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01800 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01800 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01800 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01800 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P01800 Gm8503-201ENSMUST00000118131 455 ntBASIC19.99■□□□□ 0.79
P01800 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
P01800 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P01800 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01800 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P01800 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P01800 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P01800 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
P01800 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01800 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P01800 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01800 Gm6821-201ENSMUST00000107540 542 ntBASIC19.97■□□□□ 0.79
P01800 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01800 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01800 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
P01800 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01800 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
P01800 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P01800 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
P01800 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
P01800 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
P01800 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P01800 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
P01800 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
P01800 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.94■□□□□ 0.78
P01800 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P01800 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
P01800 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
P01800 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.93■□□□□ 0.78
P01800 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P01800 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P01800 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P01800 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P01800 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P01800 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P01800 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
P01800 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
P01800 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P01800 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P01800 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01800 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01800 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.9■□□□□ 0.78
P01800 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01800 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01800 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
P01800 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
P01800 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P01800 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P01800 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P01800 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
P01800 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P01800 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P01800 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P01800 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P01800 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
P01800 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
P01800 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.87■□□□□ 0.77
P01800 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P01800 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
P01800 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.87■□□□□ 0.77
P01800 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
P01800 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P01800 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.86■□□□□ 0.77
P01800 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
P01800 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.86■□□□□ 0.77
P01800 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.86■□□□□ 0.77
P01800 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
P01800 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P01800 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P01800 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P01800 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P01800 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P01800 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
P01800 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
P01800 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
P01800 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
P01800 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.84■□□□□ 0.77
P01800 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P01800 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
P01800 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
P01800 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P01800 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.81■□□□□ 0.76
P01800 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P01800 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms