Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01643 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01643 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01643 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
P01643 Gm27502-201ENSMUST00000183495 199 ntBASIC18.36■□□□□ 0.53
P01643 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.36■□□□□ 0.53
P01643 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01643 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.35■□□□□ 0.53
P01643 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01643 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01643 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.35■□□□□ 0.53
P01643 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01643 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P01643 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P01643 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01643 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.34■□□□□ 0.53
P01643 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P01643 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01643 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01643 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01643 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01643 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
P01643 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
P01643 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01643 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01643 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01643 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.32■□□□□ 0.52
P01643 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01643 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01643 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
P01643 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01643 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01643 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01643 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01643 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
P01643 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
P01643 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01643 Terc-201ENSMUST00000082862 423 ntBASIC18.3■□□□□ 0.52
P01643 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01643 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01643 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01643 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01643 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01643 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
P01643 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.29■□□□□ 0.52
P01643 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.29■□□□□ 0.52
P01643 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P01643 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
P01643 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01643 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01643 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01643 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01643 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P01643 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01643 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01643 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01643 Gm7332-201ENSMUST00000118351 454 ntBASIC18.27■□□□□ 0.52
P01643 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.27■□□□□ 0.52
P01643 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01643 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.27■□□□□ 0.52
P01643 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01643 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01643 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01643 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.26■□□□□ 0.51
P01643 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.26■□□□□ 0.51
P01643 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01643 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P01643 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01643 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01643 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P01643 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.25■□□□□ 0.51
P01643 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.24■□□□□ 0.51
P01643 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
P01643 Gm14523-201ENSMUST00000117260 558 ntBASIC18.24■□□□□ 0.51
P01643 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01643 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01643 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
P01643 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01643 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01643 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01643 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01643 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01643 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.23■□□□□ 0.51
P01643 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01643 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01643 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.22■□□□□ 0.51
P01643 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
P01643 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01643 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01643 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
P01643 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
P01643 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.21■□□□□ 0.51
P01643 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P01643 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
P01643 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
P01643 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.2■□□□□ 0.5
P01643 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
P01643 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01643 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P01643 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms