Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Setdb1O88974 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Setdb1O88974 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Setdb1O88974 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Setdb1O88974 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Setdb1O88974 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.49■■■□□ 2.15
Setdb1O88974 Gm37136-201ENSMUST00000194368 194 ntBASIC28.49■■■□□ 2.15
Setdb1O88974 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Setdb1O88974 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC28.47■■■□□ 2.15
Setdb1O88974 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Setdb1O88974 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Setdb1O88974 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Setdb1O88974 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Setdb1O88974 Gm15546-201ENSMUST00000122095 826 ntBASIC28.46■■■□□ 2.15
Setdb1O88974 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Setdb1O88974 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Setdb1O88974 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Setdb1O88974 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC28.44■■■□□ 2.14
Setdb1O88974 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Setdb1O88974 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.44■■■□□ 2.14
Setdb1O88974 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Setdb1O88974 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC28.43■■■□□ 2.14
Setdb1O88974 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.41■■■□□ 2.14
Setdb1O88974 Gm10420-201ENSMUST00000121713 882 ntBASIC28.41■■■□□ 2.14
Setdb1O88974 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC28.41■■■□□ 2.14
Setdb1O88974 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
Setdb1O88974 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Setdb1O88974 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Setdb1O88974 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Setdb1O88974 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.39■■■□□ 2.14
Setdb1O88974 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Setdb1O88974 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Setdb1O88974 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Setdb1O88974 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Setdb1O88974 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Setdb1O88974 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Setdb1O88974 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.38■■■□□ 2.13
Setdb1O88974 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Setdb1O88974 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Setdb1O88974 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Setdb1O88974 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Setdb1O88974 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Setdb1O88974 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.34■■■□□ 2.13
Setdb1O88974 Gm5522-201ENSMUST00000189483 1242 ntBASIC28.34■■■□□ 2.13
Setdb1O88974 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Setdb1O88974 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Setdb1O88974 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Setdb1O88974 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.33■■■□□ 2.13
Setdb1O88974 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.33■■■□□ 2.13
Setdb1O88974 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Setdb1O88974 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Setdb1O88974 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC28.33■■■□□ 2.13
Setdb1O88974 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Setdb1O88974 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Setdb1O88974 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Setdb1O88974 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Setdb1O88974 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Setdb1O88974 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Setdb1O88974 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.3■■■□□ 2.12
Setdb1O88974 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.3■■■□□ 2.12
Setdb1O88974 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
Setdb1O88974 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Setdb1O88974 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC28.28■■■□□ 2.12
Setdb1O88974 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Setdb1O88974 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.27■■■□□ 2.12
Setdb1O88974 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC28.26■■■□□ 2.11
Setdb1O88974 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Setdb1O88974 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Setdb1O88974 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.26■■■□□ 2.11
Setdb1O88974 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.26■■■□□ 2.11
Setdb1O88974 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Setdb1O88974 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.24■■■□□ 2.11
Setdb1O88974 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Setdb1O88974 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Setdb1O88974 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Setdb1O88974 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Setdb1O88974 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.22■■■□□ 2.11
Setdb1O88974 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.21■■■□□ 2.11
Setdb1O88974 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Setdb1O88974 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Setdb1O88974 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28.2■■■□□ 2.11
Setdb1O88974 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28.2■■■□□ 2.11
Setdb1O88974 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
Setdb1O88974 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Setdb1O88974 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.19■■■□□ 2.1
Setdb1O88974 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.18■■■□□ 2.1
Setdb1O88974 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Setdb1O88974 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28.18■■■□□ 2.1
Setdb1O88974 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.18■■■□□ 2.1
Setdb1O88974 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28.18■■■□□ 2.1
Setdb1O88974 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Setdb1O88974 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Setdb1O88974 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Setdb1O88974 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Setdb1O88974 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Setdb1O88974 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.16■■■□□ 2.1
Setdb1O88974 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Setdb1O88974 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Setdb1O88974 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Setdb1O88974 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms