Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28,53■■■□□ 2,16
Setdb1O88974 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28,53■■■□□ 2,16
Setdb1O88974 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28,53■■■□□ 2,16
Setdb1O88974 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28,5■■■□□ 2,15
Setdb1O88974 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Setdb1O88974 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28,49■■■□□ 2,15
Setdb1O88974 Gm37136-201ENSMUST00000194368 194 ntBASIC28,49■■■□□ 2,15
Setdb1O88974 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28,49■■■□□ 2,15
Setdb1O88974 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC28,47■■■□□ 2,15
Setdb1O88974 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Setdb1O88974 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28,47■■■□□ 2,15
Setdb1O88974 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Setdb1O88974 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28,47■■■□□ 2,15
Setdb1O88974 Gm15546-201ENSMUST00000122095 826 ntBASIC28,46■■■□□ 2,15
Setdb1O88974 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28,46■■■□□ 2,15
Setdb1O88974 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28,45■■■□□ 2,15
Setdb1O88974 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28,45■■■□□ 2,14
Setdb1O88974 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC28,44■■■□□ 2,14
Setdb1O88974 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28,44■■■□□ 2,14
Setdb1O88974 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28,44■■■□□ 2,14
Setdb1O88974 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Setdb1O88974 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC28,43■■■□□ 2,14
Setdb1O88974 Gm12818-201ENSMUST00000117562 1349 ntBASIC28,41■■■□□ 2,14
Setdb1O88974 Gm10420-201ENSMUST00000121713 882 ntBASIC28,41■■■□□ 2,14
Setdb1O88974 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC28,41■■■□□ 2,14
Setdb1O88974 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28,4■■■□□ 2,14
Setdb1O88974 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Setdb1O88974 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Setdb1O88974 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Setdb1O88974 Gm13889-201ENSMUST00000099689 1386 ntBASIC28,39■■■□□ 2,14
Setdb1O88974 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Setdb1O88974 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Setdb1O88974 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,14
Setdb1O88974 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28,39■■■□□ 2,13
Setdb1O88974 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28,38■■■□□ 2,13
Setdb1O88974 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28,38■■■□□ 2,13
Setdb1O88974 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28,38■■■□□ 2,13
Setdb1O88974 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28,38■■■□□ 2,13
Setdb1O88974 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28,37■■■□□ 2,13
Setdb1O88974 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC28,36■■■□□ 2,13
Setdb1O88974 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28,34■■■□□ 2,13
Setdb1O88974 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC28,34■■■□□ 2,13
Setdb1O88974 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28,34■■■□□ 2,13
Setdb1O88974 Gm5522-201ENSMUST00000189483 1242 ntBASIC28,34■■■□□ 2,13
Setdb1O88974 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC28,34■■■□□ 2,13
Setdb1O88974 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28,34■■■□□ 2,13
Setdb1O88974 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Setdb1O88974 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28,33■■■□□ 2,13
Setdb1O88974 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28,33■■■□□ 2,13
Setdb1O88974 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28,33■■■□□ 2,13
Setdb1O88974 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC28,33■■■□□ 2,13
Setdb1O88974 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC28,33■■■□□ 2,13
Setdb1O88974 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Setdb1O88974 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC28,32■■■□□ 2,12
Setdb1O88974 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28,32■■■□□ 2,12
Setdb1O88974 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28,31■■■□□ 2,12
Setdb1O88974 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28,31■■■□□ 2,12
Setdb1O88974 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28,3■■■□□ 2,12
Setdb1O88974 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28,3■■■□□ 2,12
Setdb1O88974 Gm9910-201ENSMUST00000195385 1550 ntBASIC28,3■■■□□ 2,12
Setdb1O88974 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28,29■■■□□ 2,12
Setdb1O88974 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28,29■■■□□ 2,12
Setdb1O88974 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC28,28■■■□□ 2,12
Setdb1O88974 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28,27■■■□□ 2,12
Setdb1O88974 Fezf2-202ENSMUST00000224023 1917 ntBASIC28,27■■■□□ 2,12
Setdb1O88974 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC28,26■■■□□ 2,11
Setdb1O88974 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Setdb1O88974 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Setdb1O88974 Gm37847-201ENSMUST00000192163 1497 ntBASIC28,26■■■□□ 2,11
Setdb1O88974 Gm31748-201ENSMUST00000194938 1497 ntBASIC28,26■■■□□ 2,11
Setdb1O88974 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Setdb1O88974 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28,24■■■□□ 2,11
Setdb1O88974 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28,24■■■□□ 2,11
Setdb1O88974 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28,24■■■□□ 2,11
Setdb1O88974 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC28,22■■■□□ 2,11
Setdb1O88974 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28,22■■■□□ 2,11
Setdb1O88974 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28,22■■■□□ 2,11
Setdb1O88974 Gm14121-201ENSMUST00000121441 1380 ntBASIC28,21■■■□□ 2,11
Setdb1O88974 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28,21■■■□□ 2,11
Setdb1O88974 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Setdb1O88974 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28,2■■■□□ 2,11
Setdb1O88974 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28,2■■■□□ 2,11
Setdb1O88974 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28,2■■■□□ 2,11
Setdb1O88974 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28,19■■■□□ 2,1
Setdb1O88974 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28,19■■■□□ 2,1
Setdb1O88974 AC093043.1-201ENSMUST00000226700 898 ntBASIC28,18■■■□□ 2,1
Setdb1O88974 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28,18■■■□□ 2,1
Setdb1O88974 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28,18■■■□□ 2,1
Setdb1O88974 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28,18■■■□□ 2,1
Setdb1O88974 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28,18■■■□□ 2,1
Setdb1O88974 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28,17■■■□□ 2,1
Setdb1O88974 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28,17■■■□□ 2,1
Setdb1O88974 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28,17■■■□□ 2,1
Setdb1O88974 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Setdb1O88974 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Setdb1O88974 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28,16■■■□□ 2,1
Setdb1O88974 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28,14■■■□□ 2,1
Setdb1O88974 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,1
Setdb1O88974 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,09
Setdb1O88974 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28,13■■■□□ 2,09
Retrieved 100 of 76,532 protein–RNA pairs in 36,1 ms