Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Tnfrsf17O88472 Gm13238-201ENSMUST00000117655 780 ntBASIC21.89■■□□□ 1.09
Tnfrsf17O88472 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.88■■□□□ 1.09
Tnfrsf17O88472 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tnfrsf17O88472 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnfrsf17O88472 Gm43566-201ENSMUST00000196851 808 ntBASIC21.86■■□□□ 1.09
Tnfrsf17O88472 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.85■■□□□ 1.09
Tnfrsf17O88472 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Tnfrsf17O88472 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.85■■□□□ 1.09
Tnfrsf17O88472 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf17O88472 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf17O88472 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnfrsf17O88472 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Tnfrsf17O88472 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf17O88472 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf17O88472 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Tnfrsf17O88472 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfrsf17O88472 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tnfrsf17O88472 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Tnfrsf17O88472 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tnfrsf17O88472 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Tnfrsf17O88472 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf17O88472 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf17O88472 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.82■■□□□ 1.08
Tnfrsf17O88472 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfrsf17O88472 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfrsf17O88472 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfrsf17O88472 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfrsf17O88472 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.81■■□□□ 1.08
Tnfrsf17O88472 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.8■■□□□ 1.08
Tnfrsf17O88472 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf17O88472 Gm9959-201ENSMUST00000068277 390 ntBASIC21.8■■□□□ 1.08
Tnfrsf17O88472 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfrsf17O88472 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Tnfrsf17O88472 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf17O88472 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.79■■□□□ 1.08
Tnfrsf17O88472 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.79■■□□□ 1.08
Tnfrsf17O88472 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf17O88472 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tnfrsf17O88472 Serp2-204ENSMUST00000228055 705 ntBASIC21.78■■□□□ 1.08
Tnfrsf17O88472 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfrsf17O88472 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.77■■□□□ 1.08
Tnfrsf17O88472 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tnfrsf17O88472 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.76■■□□□ 1.07
Tnfrsf17O88472 Gm45444-201ENSMUST00000211394 898 ntBASIC21.76■■□□□ 1.07
Tnfrsf17O88472 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnfrsf17O88472 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Tnfrsf17O88472 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf17O88472 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf17O88472 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf17O88472 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.74■■□□□ 1.07
Tnfrsf17O88472 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf17O88472 Terc-201ENSMUST00000082862 423 ntBASIC21.74■■□□□ 1.07
Tnfrsf17O88472 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.74■■□□□ 1.07
Tnfrsf17O88472 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfrsf17O88472 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Tnfrsf17O88472 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.73■■□□□ 1.07
Tnfrsf17O88472 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfrsf17O88472 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Tnfrsf17O88472 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfrsf17O88472 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.71■■□□□ 1.07
Tnfrsf17O88472 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.71■■□□□ 1.07
Tnfrsf17O88472 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Tnfrsf17O88472 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tnfrsf17O88472 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfrsf17O88472 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.7■■□□□ 1.06
Tnfrsf17O88472 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf17O88472 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf17O88472 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf17O88472 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf17O88472 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf17O88472 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfrsf17O88472 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Tnfrsf17O88472 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.68■■□□□ 1.06
Tnfrsf17O88472 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Tnfrsf17O88472 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfrsf17O88472 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfrsf17O88472 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.68■■□□□ 1.06
Tnfrsf17O88472 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.67■■□□□ 1.06
Tnfrsf17O88472 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf17O88472 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf17O88472 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf17O88472 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.66■■□□□ 1.06
Tnfrsf17O88472 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf17O88472 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.65■■□□□ 1.06
Tnfrsf17O88472 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf17O88472 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf17O88472 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf17O88472 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.64■■□□□ 1.05
Tnfrsf17O88472 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf17O88472 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.64■■□□□ 1.05
Tnfrsf17O88472 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf17O88472 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf17O88472 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.63■■□□□ 1.05
Tnfrsf17O88472 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.63■■□□□ 1.05
Tnfrsf17O88472 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Tnfrsf17O88472 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf17O88472 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Tnfrsf17O88472 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf17O88472 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms