Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rdh5O55240 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rdh5O55240 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rdh5O55240 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rdh5O55240 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rdh5O55240 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.71■■□□□ 1.07
Rdh5O55240 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.71■■□□□ 1.07
Rdh5O55240 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rdh5O55240 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rdh5O55240 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rdh5O55240 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rdh5O55240 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rdh5O55240 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rdh5O55240 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rdh5O55240 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rdh5O55240 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rdh5O55240 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rdh5O55240 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rdh5O55240 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rdh5O55240 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rdh5O55240 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rdh5O55240 Gm11599-201ENSMUST00000118720 878 ntBASIC21.67■■□□□ 1.06
Rdh5O55240 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rdh5O55240 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rdh5O55240 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rdh5O55240 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rdh5O55240 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.66■■□□□ 1.06
Rdh5O55240 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rdh5O55240 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rdh5O55240 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rdh5O55240 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Rdh5O55240 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rdh5O55240 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rdh5O55240 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.63■■□□□ 1.05
Rdh5O55240 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rdh5O55240 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rdh5O55240 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.63■■□□□ 1.05
Rdh5O55240 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rdh5O55240 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rdh5O55240 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rdh5O55240 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rdh5O55240 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rdh5O55240 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rdh5O55240 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rdh5O55240 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.6■■□□□ 1.05
Rdh5O55240 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rdh5O55240 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.6■■□□□ 1.05
Rdh5O55240 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.6■■□□□ 1.05
Rdh5O55240 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rdh5O55240 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Rdh5O55240 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rdh5O55240 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rdh5O55240 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rdh5O55240 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rdh5O55240 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rdh5O55240 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rdh5O55240 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Rdh5O55240 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rdh5O55240 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rdh5O55240 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rdh5O55240 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Rdh5O55240 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rdh5O55240 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rdh5O55240 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Rdh5O55240 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Rdh5O55240 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rdh5O55240 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rdh5O55240 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rdh5O55240 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rdh5O55240 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rdh5O55240 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rdh5O55240 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rdh5O55240 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rdh5O55240 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.55■■□□□ 1.04
Rdh5O55240 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Rdh5O55240 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rdh5O55240 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rdh5O55240 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rdh5O55240 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rdh5O55240 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rdh5O55240 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rdh5O55240 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rdh5O55240 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.52■■□□□ 1.04
Rdh5O55240 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Rdh5O55240 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rdh5O55240 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rdh5O55240 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rdh5O55240 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rdh5O55240 Gm4799-201ENSMUST00000095396 657 ntBASIC21.5■■□□□ 1.03
Rdh5O55240 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rdh5O55240 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.5■■□□□ 1.03
Rdh5O55240 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rdh5O55240 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rdh5O55240 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rdh5O55240 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rdh5O55240 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rdh5O55240 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rdh5O55240 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rdh5O55240 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rdh5O55240 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms