Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Cntnap1O54991 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC31.43■■■□□ 2.62
Cntnap1O54991 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC31.43■■■□□ 2.62
Cntnap1O54991 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cntnap1O54991 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Cntnap1O54991 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cntnap1O54991 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cntnap1O54991 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Cntnap1O54991 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cntnap1O54991 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cntnap1O54991 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Cntnap1O54991 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cntnap1O54991 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC31.41■■■□□ 2.62
Cntnap1O54991 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cntnap1O54991 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cntnap1O54991 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Cntnap1O54991 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
Cntnap1O54991 Gm42501-201ENSMUST00000200220 1026 ntBASIC31.38■■■□□ 2.61
Cntnap1O54991 Nsd1-203ENSMUST00000224156 1149 ntBASIC31.38■■■□□ 2.61
Cntnap1O54991 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
Cntnap1O54991 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cntnap1O54991 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Cntnap1O54991 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cntnap1O54991 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Cntnap1O54991 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Cntnap1O54991 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC31.33■■■□□ 2.61
Cntnap1O54991 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.33■■■□□ 2.61
Cntnap1O54991 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Cntnap1O54991 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Cntnap1O54991 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cntnap1O54991 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC31.3■■■□□ 2.6
Cntnap1O54991 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Cntnap1O54991 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cntnap1O54991 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cntnap1O54991 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cntnap1O54991 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cntnap1O54991 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cntnap1O54991 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Cntnap1O54991 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Cntnap1O54991 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Cntnap1O54991 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cntnap1O54991 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cntnap1O54991 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC31.24■■■□□ 2.59
Cntnap1O54991 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cntnap1O54991 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cntnap1O54991 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cntnap1O54991 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.22■■■□□ 2.59
Cntnap1O54991 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC31.22■■■□□ 2.59
Cntnap1O54991 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Cntnap1O54991 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cntnap1O54991 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cntnap1O54991 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Cntnap1O54991 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Cntnap1O54991 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
Cntnap1O54991 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC31.2■■■□□ 2.59
Cntnap1O54991 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cntnap1O54991 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Cntnap1O54991 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Cntnap1O54991 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cntnap1O54991 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC31.18■■■□□ 2.58
Cntnap1O54991 Gm18755-201ENSMUST00000218030 1099 ntBASIC31.18■■■□□ 2.58
Cntnap1O54991 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cntnap1O54991 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Cntnap1O54991 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Cntnap1O54991 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC31.17■■■□□ 2.58
Cntnap1O54991 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cntnap1O54991 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cntnap1O54991 Gm43592-201ENSMUST00000196922 1165 ntBASIC31.16■■■□□ 2.58
Cntnap1O54991 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC31.15■■■□□ 2.58
Cntnap1O54991 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
Cntnap1O54991 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.15■■■□□ 2.58
Cntnap1O54991 Terc-201ENSMUST00000082862 423 ntBASIC31.15■■■□□ 2.58
Cntnap1O54991 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cntnap1O54991 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Cntnap1O54991 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cntnap1O54991 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC31.1■■■□□ 2.57
Cntnap1O54991 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cntnap1O54991 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cntnap1O54991 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Cntnap1O54991 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cntnap1O54991 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cntnap1O54991 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC31.08■■■□□ 2.57
Cntnap1O54991 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cntnap1O54991 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cntnap1O54991 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
Cntnap1O54991 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cntnap1O54991 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cntnap1O54991 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cntnap1O54991 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cntnap1O54991 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cntnap1O54991 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cntnap1O54991 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Cntnap1O54991 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Cntnap1O54991 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.04■■■□□ 2.56
Cntnap1O54991 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC31.04■■■□□ 2.56
Cntnap1O54991 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.04■■■□□ 2.56
Cntnap1O54991 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cntnap1O54991 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Cntnap1O54991 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Cntnap1O54991 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms