Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tnfsf11O35235 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tnfsf11O35235 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tnfsf11O35235 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf11O35235 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tnfsf11O35235 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Tnfsf11O35235 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf11O35235 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf11O35235 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf11O35235 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf11O35235 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf11O35235 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tnfsf11O35235 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf11O35235 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.89■□□□□ 0.45
Tnfsf11O35235 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.89■□□□□ 0.45
Tnfsf11O35235 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.89■□□□□ 0.45
Tnfsf11O35235 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf11O35235 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf11O35235 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf11O35235 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tnfsf11O35235 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf11O35235 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf11O35235 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf11O35235 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tnfsf11O35235 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfsf11O35235 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfsf11O35235 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.87■□□□□ 0.45
Tnfsf11O35235 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfsf11O35235 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfsf11O35235 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfsf11O35235 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Tnfsf11O35235 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Tnfsf11O35235 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Tnfsf11O35235 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Tnfsf11O35235 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Tnfsf11O35235 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfsf11O35235 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfsf11O35235 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfsf11O35235 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Tnfsf11O35235 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Tnfsf11O35235 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfsf11O35235 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfsf11O35235 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfsf11O35235 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfsf11O35235 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfsf11O35235 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Tnfsf11O35235 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfsf11O35235 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfsf11O35235 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfsf11O35235 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tnfsf11O35235 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfsf11O35235 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfsf11O35235 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfsf11O35235 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfsf11O35235 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Tnfsf11O35235 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfsf11O35235 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.81■□□□□ 0.44
Tnfsf11O35235 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tnfsf11O35235 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfsf11O35235 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Tnfsf11O35235 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tnfsf11O35235 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfsf11O35235 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
Tnfsf11O35235 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfsf11O35235 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfsf11O35235 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tnfsf11O35235 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfsf11O35235 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfsf11O35235 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tnfsf11O35235 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.79■□□□□ 0.44
Tnfsf11O35235 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfsf11O35235 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfsf11O35235 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tnfsf11O35235 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfsf11O35235 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfsf11O35235 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfsf11O35235 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.77■□□□□ 0.44
Tnfsf11O35235 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfsf11O35235 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfsf11O35235 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfsf11O35235 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfsf11O35235 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfsf11O35235 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfsf11O35235 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfsf11O35235 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfsf11O35235 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.74■□□□□ 0.43
Tnfsf11O35235 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfsf11O35235 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfsf11O35235 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfsf11O35235 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfsf11O35235 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfsf11O35235 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.73■□□□□ 0.43
Tnfsf11O35235 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.73■□□□□ 0.43
Tnfsf11O35235 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.73■□□□□ 0.43
Tnfsf11O35235 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf11O35235 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf11O35235 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf11O35235 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfsf11O35235 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Tnfsf11O35235 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms