Protein–RNA interactions for Protein: J3QPL3

Gm5225, Predicted gene 5225, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5225J3QPL3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5225J3QPL3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5225J3QPL3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5225J3QPL3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.16■□□□□ 0.82
Gm5225J3QPL3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Gm5225J3QPL3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm5225J3QPL3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5225J3QPL3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Gm5225J3QPL3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5225J3QPL3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5225J3QPL3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Gm5225J3QPL3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm5225J3QPL3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5225J3QPL3 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.12■□□□□ 0.81
Gm5225J3QPL3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Gm5225J3QPL3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.12■□□□□ 0.81
Gm5225J3QPL3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5225J3QPL3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm5225J3QPL3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5225J3QPL3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5225J3QPL3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5225J3QPL3 Gm7432-201ENSMUST00000210343 879 ntBASIC20.11■□□□□ 0.81
Gm5225J3QPL3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5225J3QPL3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5225J3QPL3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm5225J3QPL3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5225J3QPL3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm5225J3QPL3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Gm5225J3QPL3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5225J3QPL3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5225J3QPL3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5225J3QPL3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.09■□□□□ 0.81
Gm5225J3QPL3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.09■□□□□ 0.81
Gm5225J3QPL3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm5225J3QPL3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm5225J3QPL3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm5225J3QPL3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gm5225J3QPL3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm5225J3QPL3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.08■□□□□ 0.8
Gm5225J3QPL3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5225J3QPL3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Gm5225J3QPL3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm5225J3QPL3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gm5225J3QPL3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5225J3QPL3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5225J3QPL3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5225J3QPL3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5225J3QPL3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5225J3QPL3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gm5225J3QPL3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5225J3QPL3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm5225J3QPL3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm5225J3QPL3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm5225J3QPL3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5225J3QPL3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5225J3QPL3 Gm11599-201ENSMUST00000118720 878 ntBASIC20.04■□□□□ 0.8
Gm5225J3QPL3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5225J3QPL3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Gm5225J3QPL3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5225J3QPL3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm5225J3QPL3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gm5225J3QPL3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gm5225J3QPL3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5225J3QPL3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Gm5225J3QPL3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm5225J3QPL3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm5225J3QPL3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm5225J3QPL3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm5225J3QPL3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm5225J3QPL3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm5225J3QPL3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Gm5225J3QPL3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm5225J3QPL3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm5225J3QPL3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm5225J3QPL3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm5225J3QPL3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.99■□□□□ 0.79
Gm5225J3QPL3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm5225J3QPL3 Gm4799-201ENSMUST00000095396 657 ntBASIC19.99■□□□□ 0.79
Gm5225J3QPL3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm5225J3QPL3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm5225J3QPL3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm5225J3QPL3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm5225J3QPL3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm5225J3QPL3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm5225J3QPL3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm5225J3QPL3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm5225J3QPL3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm5225J3QPL3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm5225J3QPL3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm5225J3QPL3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.96■□□□□ 0.79
Gm5225J3QPL3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.96■□□□□ 0.79
Gm5225J3QPL3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Gm5225J3QPL3 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.95■□□□□ 0.79
Gm5225J3QPL3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Gm5225J3QPL3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.95■□□□□ 0.78
Gm5225J3QPL3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm5225J3QPL3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Gm5225J3QPL3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm5225J3QPL3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm5225J3QPL3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms