Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
Ift140E9PY46 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
Ift140E9PY46 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC38.2■■■■□ 3.71
Ift140E9PY46 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC38.2■■■■□ 3.71
Ift140E9PY46 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
Ift140E9PY46 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC38.19■■■■□ 3.7
Ift140E9PY46 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC38.18■■■■□ 3.7
Ift140E9PY46 Gm43566-201ENSMUST00000196851 808 ntBASIC38.18■■■■□ 3.7
Ift140E9PY46 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
Ift140E9PY46 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC38.17■■■■□ 3.7
Ift140E9PY46 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC38.17■■■■□ 3.7
Ift140E9PY46 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC38.15■■■■□ 3.7
Ift140E9PY46 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC38.15■■■■□ 3.7
Ift140E9PY46 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC38.14■■■■□ 3.7
Ift140E9PY46 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC38.13■■■■□ 3.69
Ift140E9PY46 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
Ift140E9PY46 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC38.11■■■■□ 3.69
Ift140E9PY46 Gm13238-201ENSMUST00000117655 780 ntBASIC38.11■■■■□ 3.69
Ift140E9PY46 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC38.11■■■■□ 3.69
Ift140E9PY46 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC38.11■■■■□ 3.69
Ift140E9PY46 Terc-201ENSMUST00000082862 423 ntBASIC38.11■■■■□ 3.69
Ift140E9PY46 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC38.1■■■■□ 3.69
Ift140E9PY46 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
Ift140E9PY46 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
Ift140E9PY46 Gm15820-201ENSMUST00000201566 728 ntBASIC38.09■■■■□ 3.69
Ift140E9PY46 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
Ift140E9PY46 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Ift140E9PY46 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
Ift140E9PY46 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Ift140E9PY46 Gm45102-201ENSMUST00000207427 857 ntBASIC38.08■■■■□ 3.69
Ift140E9PY46 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
Ift140E9PY46 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC38.05■■■■□ 3.68
Ift140E9PY46 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
Ift140E9PY46 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Ift140E9PY46 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC38.03■■■■□ 3.68
Ift140E9PY46 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC38.03■■■■□ 3.68
Ift140E9PY46 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC38.02■■■■□ 3.68
Ift140E9PY46 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC38.01■■■■□ 3.68
Ift140E9PY46 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC38■■■■□ 3.67
Ift140E9PY46 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC38■■■■□ 3.67
Ift140E9PY46 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Ift140E9PY46 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC37.99■■■■□ 3.67
Ift140E9PY46 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
Ift140E9PY46 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC37.98■■■■□ 3.67
Ift140E9PY46 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC37.98■■■■□ 3.67
Ift140E9PY46 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Ift140E9PY46 Gm14117-201ENSMUST00000122417 843 ntBASIC37.97■■■■□ 3.67
Ift140E9PY46 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC37.97■■■■□ 3.67
Ift140E9PY46 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC37.97■■■■□ 3.67
Ift140E9PY46 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Ift140E9PY46 Gm45444-201ENSMUST00000211394 898 ntBASIC37.96■■■■□ 3.67
Ift140E9PY46 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC37.95■■■■□ 3.67
Ift140E9PY46 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC37.95■■■■□ 3.67
Ift140E9PY46 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
Ift140E9PY46 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC37.91■■■■□ 3.66
Ift140E9PY46 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Ift140E9PY46 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Ift140E9PY46 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC37.9■■■■□ 3.66
Ift140E9PY46 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
Ift140E9PY46 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC37.9■■■■□ 3.66
Ift140E9PY46 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Ift140E9PY46 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC37.88■■■■□ 3.65
Ift140E9PY46 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
Ift140E9PY46 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC37.86■■■■□ 3.65
Ift140E9PY46 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
Ift140E9PY46 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC37.86■■■■□ 3.65
Ift140E9PY46 Nsd1-203ENSMUST00000224156 1149 ntBASIC37.86■■■■□ 3.65
Ift140E9PY46 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC37.84■■■■□ 3.65
Ift140E9PY46 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC37.84■■■■□ 3.65
Ift140E9PY46 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Ift140E9PY46 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Ift140E9PY46 Gm43592-201ENSMUST00000196922 1165 ntBASIC37.84■■■■□ 3.65
Ift140E9PY46 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Ift140E9PY46 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
Ift140E9PY46 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC37.82■■■■□ 3.64
Ift140E9PY46 Gm44428-201ENSMUST00000204474 874 ntBASIC37.82■■■■□ 3.64
Ift140E9PY46 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
Ift140E9PY46 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC37.82■■■■□ 3.64
Ift140E9PY46 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC37.81■■■■□ 3.64
Ift140E9PY46 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC37.79■■■■□ 3.64
Ift140E9PY46 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
Ift140E9PY46 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC37.79■■■■□ 3.64
Ift140E9PY46 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Ift140E9PY46 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC37.78■■■■□ 3.64
Ift140E9PY46 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Ift140E9PY46 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
Ift140E9PY46 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Ift140E9PY46 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC37.77■■■■□ 3.64
Ift140E9PY46 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Ift140E9PY46 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC37.76■■■■□ 3.64
Ift140E9PY46 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Ift140E9PY46 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Ift140E9PY46 Gm14121-201ENSMUST00000121441 1380 ntBASIC37.74■■■■□ 3.63
Ift140E9PY46 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC37.74■■■■□ 3.63
Ift140E9PY46 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC37.74■■■■□ 3.63
Ift140E9PY46 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
Ift140E9PY46 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Ift140E9PY46 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Ift140E9PY46 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
Ift140E9PY46 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC37.72■■■■□ 3.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms