Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank1D3YZU1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank1D3YZU1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shank1D3YZU1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.84■□□□□ 0.93
Shank1D3YZU1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shank1D3YZU1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shank1D3YZU1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.82■□□□□ 0.92
Shank1D3YZU1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.82■□□□□ 0.92
Shank1D3YZU1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Shank1D3YZU1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shank1D3YZU1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shank1D3YZU1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shank1D3YZU1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shank1D3YZU1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shank1D3YZU1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shank1D3YZU1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Shank1D3YZU1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shank1D3YZU1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shank1D3YZU1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Shank1D3YZU1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Shank1D3YZU1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.79■□□□□ 0.92
Shank1D3YZU1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Shank1D3YZU1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.79■□□□□ 0.92
Shank1D3YZU1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shank1D3YZU1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank1D3YZU1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank1D3YZU1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shank1D3YZU1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shank1D3YZU1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shank1D3YZU1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shank1D3YZU1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Shank1D3YZU1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Shank1D3YZU1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.76■□□□□ 0.91
Shank1D3YZU1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.75■□□□□ 0.91
Shank1D3YZU1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Shank1D3YZU1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shank1D3YZU1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.74■□□□□ 0.91
Shank1D3YZU1 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.74■□□□□ 0.91
Shank1D3YZU1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shank1D3YZU1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.74■□□□□ 0.91
Shank1D3YZU1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Shank1D3YZU1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Shank1D3YZU1 Terc-201ENSMUST00000082862 423 ntBASIC20.73■□□□□ 0.91
Shank1D3YZU1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Shank1D3YZU1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Shank1D3YZU1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Shank1D3YZU1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank1D3YZU1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shank1D3YZU1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank1D3YZU1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Shank1D3YZU1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.71■□□□□ 0.91
Shank1D3YZU1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Shank1D3YZU1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Shank1D3YZU1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.71■□□□□ 0.91
Shank1D3YZU1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.7■□□□□ 0.9
Shank1D3YZU1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank1D3YZU1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Shank1D3YZU1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Shank1D3YZU1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Shank1D3YZU1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Shank1D3YZU1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.69■□□□□ 0.9
Shank1D3YZU1 Gm43566-201ENSMUST00000196851 808 ntBASIC20.69■□□□□ 0.9
Shank1D3YZU1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Shank1D3YZU1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.69■□□□□ 0.9
Shank1D3YZU1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Shank1D3YZU1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Shank1D3YZU1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Shank1D3YZU1 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.67■□□□□ 0.9
Shank1D3YZU1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Shank1D3YZU1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shank1D3YZU1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
Shank1D3YZU1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank1D3YZU1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Shank1D3YZU1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.66■□□□□ 0.9
Shank1D3YZU1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Shank1D3YZU1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank1D3YZU1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Shank1D3YZU1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank1D3YZU1 Gm14117-201ENSMUST00000122417 843 ntBASIC20.65■□□□□ 0.9
Shank1D3YZU1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Shank1D3YZU1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shank1D3YZU1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Shank1D3YZU1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Shank1D3YZU1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shank1D3YZU1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.64■□□□□ 0.89
Shank1D3YZU1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Shank1D3YZU1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Shank1D3YZU1 Gm13238-201ENSMUST00000117655 780 ntBASIC20.63■□□□□ 0.89
Shank1D3YZU1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank1D3YZU1 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.63■□□□□ 0.89
Shank1D3YZU1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank1D3YZU1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank1D3YZU1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Shank1D3YZU1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Shank1D3YZU1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.62■□□□□ 0.89
Shank1D3YZU1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Shank1D3YZU1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Shank1D3YZU1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Shank1D3YZU1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shank1D3YZU1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms