Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.18■□□□□ 0.5
Col6a5A6H584 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col6a5A6H584 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a5A6H584 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Col6a5A6H584 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col6a5A6H584 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a5A6H584 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col6a5A6H584 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Col6a5A6H584 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a5A6H584 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a5A6H584 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a5A6H584 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Col6a5A6H584 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a5A6H584 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a5A6H584 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a5A6H584 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a5A6H584 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col6a5A6H584 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a5A6H584 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a5A6H584 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a5A6H584 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Col6a5A6H584 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a5A6H584 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col6a5A6H584 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Col6a5A6H584 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a5A6H584 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.11■□□□□ 0.49
Col6a5A6H584 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col6a5A6H584 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col6a5A6H584 Gm37136-201ENSMUST00000194368 194 ntBASIC18.11■□□□□ 0.49
Col6a5A6H584 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.11■□□□□ 0.49
Col6a5A6H584 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.11■□□□□ 0.49
Col6a5A6H584 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.11■□□□□ 0.49
Col6a5A6H584 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Col6a5A6H584 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.1■□□□□ 0.49
Col6a5A6H584 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.1■□□□□ 0.49
Col6a5A6H584 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.1■□□□□ 0.49
Col6a5A6H584 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.09■□□□□ 0.49
Col6a5A6H584 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a5A6H584 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.09■□□□□ 0.49
Col6a5A6H584 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a5A6H584 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.09■□□□□ 0.49
Col6a5A6H584 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Col6a5A6H584 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a5A6H584 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col6a5A6H584 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col6a5A6H584 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.08■□□□□ 0.49
Col6a5A6H584 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col6a5A6H584 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col6a5A6H584 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.08■□□□□ 0.49
Col6a5A6H584 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.08■□□□□ 0.49
Col6a5A6H584 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Col6a5A6H584 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col6a5A6H584 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col6a5A6H584 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col6a5A6H584 Gm9812-201ENSMUST00000061934 968 ntBASIC18.06■□□□□ 0.48
Col6a5A6H584 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col6a5A6H584 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
Col6a5A6H584 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Col6a5A6H584 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.05■□□□□ 0.48
Col6a5A6H584 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col6a5A6H584 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col6a5A6H584 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col6a5A6H584 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Col6a5A6H584 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col6a5A6H584 Gm21956-201ENSMUST00000179946 522 ntBASIC18.02■□□□□ 0.47
Col6a5A6H584 Gm13241-201ENSMUST00000094493 780 ntBASIC18.02■□□□□ 0.47
Col6a5A6H584 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Col6a5A6H584 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a5A6H584 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.01■□□□□ 0.47
Col6a5A6H584 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a5A6H584 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col6a5A6H584 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Col6a5A6H584 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col6a5A6H584 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col6a5A6H584 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col6a5A6H584 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.99■□□□□ 0.47
Col6a5A6H584 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col6a5A6H584 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Col6a5A6H584 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.98■□□□□ 0.47
Col6a5A6H584 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col6a5A6H584 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a5A6H584 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a5A6H584 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a5A6H584 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col6a5A6H584 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a5A6H584 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col6a5A6H584 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col6a5A6H584 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.96■□□□□ 0.47
Col6a5A6H584 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col6a5A6H584 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Col6a5A6H584 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col6a5A6H584 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col6a5A6H584 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.95■□□□□ 0.46
Col6a5A6H584 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col6a5A6H584 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.95■□□□□ 0.46
Col6a5A6H584 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col6a5A6H584 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a5A6H584 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col6a5A6H584 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Col6a5A6H584 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 165 ms