Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd6A3KFM7 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.52■□□□□ 0.72
Chd6A3KFM7 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.52■□□□□ 0.72
Chd6A3KFM7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd6A3KFM7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.52■□□□□ 0.71
Chd6A3KFM7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd6A3KFM7 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.51■□□□□ 0.71
Chd6A3KFM7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.51■□□□□ 0.71
Chd6A3KFM7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chd6A3KFM7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.5■□□□□ 0.71
Chd6A3KFM7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chd6A3KFM7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chd6A3KFM7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.5■□□□□ 0.71
Chd6A3KFM7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd6A3KFM7 Gm29257-201ENSMUST00000186115 639 ntBASIC19.5■□□□□ 0.71
Chd6A3KFM7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.5■□□□□ 0.71
Chd6A3KFM7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chd6A3KFM7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chd6A3KFM7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Chd6A3KFM7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.48■□□□□ 0.71
Chd6A3KFM7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chd6A3KFM7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chd6A3KFM7 Gm30023-201ENSMUST00000197970 889 ntBASIC19.47■□□□□ 0.71
Chd6A3KFM7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chd6A3KFM7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Chd6A3KFM7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Chd6A3KFM7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd6A3KFM7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
Chd6A3KFM7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd6A3KFM7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd6A3KFM7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Chd6A3KFM7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd6A3KFM7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chd6A3KFM7 Etf1-202ENSMUST00000180351 108 ntBASIC19.45■□□□□ 0.7
Chd6A3KFM7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chd6A3KFM7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Chd6A3KFM7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chd6A3KFM7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Chd6A3KFM7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd6A3KFM7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chd6A3KFM7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd6A3KFM7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chd6A3KFM7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.43■□□□□ 0.7
Chd6A3KFM7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd6A3KFM7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd6A3KFM7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chd6A3KFM7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chd6A3KFM7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chd6A3KFM7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chd6A3KFM7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chd6A3KFM7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chd6A3KFM7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd6A3KFM7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd6A3KFM7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Chd6A3KFM7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chd6A3KFM7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Chd6A3KFM7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chd6A3KFM7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.39■□□□□ 0.7
Chd6A3KFM7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd6A3KFM7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chd6A3KFM7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.39■□□□□ 0.69
Chd6A3KFM7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.39■□□□□ 0.69
Chd6A3KFM7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd6A3KFM7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd6A3KFM7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.38■□□□□ 0.69
Chd6A3KFM7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Chd6A3KFM7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Chd6A3KFM7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.37■□□□□ 0.69
Chd6A3KFM7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chd6A3KFM7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chd6A3KFM7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.35■□□□□ 0.69
Chd6A3KFM7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.35■□□□□ 0.69
Chd6A3KFM7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd6A3KFM7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd6A3KFM7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.34■□□□□ 0.69
Chd6A3KFM7 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.33■□□□□ 0.68
Chd6A3KFM7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chd6A3KFM7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chd6A3KFM7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd6A3KFM7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd6A3KFM7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd6A3KFM7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd6A3KFM7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd6A3KFM7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd6A3KFM7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Chd6A3KFM7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.31■□□□□ 0.68
Chd6A3KFM7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd6A3KFM7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd6A3KFM7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd6A3KFM7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.3■□□□□ 0.68
Chd6A3KFM7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd6A3KFM7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd6A3KFM7 Gm8495-201ENSMUST00000188740 694 ntBASIC19.3■□□□□ 0.68
Chd6A3KFM7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd6A3KFM7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd6A3KFM7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd6A3KFM7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd6A3KFM7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.26■□□□□ 0.67
Chd6A3KFM7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd6A3KFM7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms