Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.06■□□□□ 0.64
Lnp1A0A1B0GSK3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.06■□□□□ 0.64
Lnp1A0A1B0GSK3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
Lnp1A0A1B0GSK3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Lnp1A0A1B0GSK3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lnp1A0A1B0GSK3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Lnp1A0A1B0GSK3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.05■□□□□ 0.64
Lnp1A0A1B0GSK3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lnp1A0A1B0GSK3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Lnp1A0A1B0GSK3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lnp1A0A1B0GSK3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Lnp1A0A1B0GSK3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lnp1A0A1B0GSK3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Lnp1A0A1B0GSK3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Lnp1A0A1B0GSK3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lnp1A0A1B0GSK3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lnp1A0A1B0GSK3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lnp1A0A1B0GSK3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.03■□□□□ 0.64
Lnp1A0A1B0GSK3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lnp1A0A1B0GSK3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lnp1A0A1B0GSK3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Lnp1A0A1B0GSK3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lnp1A0A1B0GSK3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lnp1A0A1B0GSK3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lnp1A0A1B0GSK3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lnp1A0A1B0GSK3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lnp1A0A1B0GSK3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lnp1A0A1B0GSK3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.01■□□□□ 0.63
Lnp1A0A1B0GSK3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.01■□□□□ 0.63
Lnp1A0A1B0GSK3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lnp1A0A1B0GSK3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Lnp1A0A1B0GSK3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lnp1A0A1B0GSK3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lnp1A0A1B0GSK3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lnp1A0A1B0GSK3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lnp1A0A1B0GSK3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lnp1A0A1B0GSK3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lnp1A0A1B0GSK3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lnp1A0A1B0GSK3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lnp1A0A1B0GSK3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lnp1A0A1B0GSK3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.98■□□□□ 0.63
Lnp1A0A1B0GSK3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lnp1A0A1B0GSK3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lnp1A0A1B0GSK3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lnp1A0A1B0GSK3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lnp1A0A1B0GSK3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lnp1A0A1B0GSK3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lnp1A0A1B0GSK3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lnp1A0A1B0GSK3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lnp1A0A1B0GSK3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lnp1A0A1B0GSK3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lnp1A0A1B0GSK3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lnp1A0A1B0GSK3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lnp1A0A1B0GSK3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Lnp1A0A1B0GSK3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lnp1A0A1B0GSK3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lnp1A0A1B0GSK3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lnp1A0A1B0GSK3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lnp1A0A1B0GSK3 Gm7432-201ENSMUST00000210343 879 ntBASIC18.94■□□□□ 0.62
Lnp1A0A1B0GSK3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lnp1A0A1B0GSK3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lnp1A0A1B0GSK3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lnp1A0A1B0GSK3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lnp1A0A1B0GSK3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Lnp1A0A1B0GSK3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.93■□□□□ 0.62
Lnp1A0A1B0GSK3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lnp1A0A1B0GSK3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lnp1A0A1B0GSK3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lnp1A0A1B0GSK3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lnp1A0A1B0GSK3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.91■□□□□ 0.62
Lnp1A0A1B0GSK3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Lnp1A0A1B0GSK3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lnp1A0A1B0GSK3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lnp1A0A1B0GSK3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lnp1A0A1B0GSK3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lnp1A0A1B0GSK3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lnp1A0A1B0GSK3 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.9■□□□□ 0.62
Lnp1A0A1B0GSK3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lnp1A0A1B0GSK3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lnp1A0A1B0GSK3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lnp1A0A1B0GSK3 Gm11599-201ENSMUST00000118720 878 ntBASIC18.89■□□□□ 0.61
Lnp1A0A1B0GSK3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lnp1A0A1B0GSK3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.88■□□□□ 0.61
Lnp1A0A1B0GSK3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lnp1A0A1B0GSK3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lnp1A0A1B0GSK3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lnp1A0A1B0GSK3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.87■□□□□ 0.61
Lnp1A0A1B0GSK3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lnp1A0A1B0GSK3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lnp1A0A1B0GSK3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lnp1A0A1B0GSK3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms