Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcna-ps2A0A140T8V5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcna-ps2A0A140T8V5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcna-ps2A0A140T8V5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcna-ps2A0A140T8V5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcna-ps2A0A140T8V5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcna-ps2A0A140T8V5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcna-ps2A0A140T8V5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Pcna-ps2A0A140T8V5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
Pcna-ps2A0A140T8V5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcna-ps2A0A140T8V5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcna-ps2A0A140T8V5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Pcna-ps2A0A140T8V5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcna-ps2A0A140T8V5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcna-ps2A0A140T8V5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcna-ps2A0A140T8V5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
Pcna-ps2A0A140T8V5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcna-ps2A0A140T8V5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcna-ps2A0A140T8V5 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.89■■□□□ 1.25
Pcna-ps2A0A140T8V5 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.89■■□□□ 1.25
Pcna-ps2A0A140T8V5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcna-ps2A0A140T8V5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.88■■□□□ 1.25
Pcna-ps2A0A140T8V5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcna-ps2A0A140T8V5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcna-ps2A0A140T8V5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcna-ps2A0A140T8V5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcna-ps2A0A140T8V5 Particl-201ENSMUST00000205370 1560 ntBASIC22.87■■□□□ 1.25
Pcna-ps2A0A140T8V5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcna-ps2A0A140T8V5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcna-ps2A0A140T8V5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Pcna-ps2A0A140T8V5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pcna-ps2A0A140T8V5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pcna-ps2A0A140T8V5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcna-ps2A0A140T8V5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pcna-ps2A0A140T8V5 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.84■■□□□ 1.25
Pcna-ps2A0A140T8V5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Pcna-ps2A0A140T8V5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Pcna-ps2A0A140T8V5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcna-ps2A0A140T8V5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcna-ps2A0A140T8V5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Pcna-ps2A0A140T8V5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcna-ps2A0A140T8V5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcna-ps2A0A140T8V5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcna-ps2A0A140T8V5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.81■■□□□ 1.24
Pcna-ps2A0A140T8V5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Pcna-ps2A0A140T8V5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Pcna-ps2A0A140T8V5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Pcna-ps2A0A140T8V5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcna-ps2A0A140T8V5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
Pcna-ps2A0A140T8V5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcna-ps2A0A140T8V5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Pcna-ps2A0A140T8V5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcna-ps2A0A140T8V5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcna-ps2A0A140T8V5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.78■■□□□ 1.24
Pcna-ps2A0A140T8V5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.78■■□□□ 1.24
Pcna-ps2A0A140T8V5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.77■■□□□ 1.24
Pcna-ps2A0A140T8V5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcna-ps2A0A140T8V5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.76■■□□□ 1.23
Pcna-ps2A0A140T8V5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.76■■□□□ 1.23
Pcna-ps2A0A140T8V5 Gm7432-201ENSMUST00000210343 879 ntBASIC22.76■■□□□ 1.23
Pcna-ps2A0A140T8V5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcna-ps2A0A140T8V5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcna-ps2A0A140T8V5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcna-ps2A0A140T8V5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcna-ps2A0A140T8V5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.74■■□□□ 1.23
Pcna-ps2A0A140T8V5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcna-ps2A0A140T8V5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcna-ps2A0A140T8V5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcna-ps2A0A140T8V5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcna-ps2A0A140T8V5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcna-ps2A0A140T8V5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcna-ps2A0A140T8V5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcna-ps2A0A140T8V5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcna-ps2A0A140T8V5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
Pcna-ps2A0A140T8V5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcna-ps2A0A140T8V5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcna-ps2A0A140T8V5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcna-ps2A0A140T8V5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcna-ps2A0A140T8V5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcna-ps2A0A140T8V5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcna-ps2A0A140T8V5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcna-ps2A0A140T8V5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcna-ps2A0A140T8V5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pcna-ps2A0A140T8V5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pcna-ps2A0A140T8V5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcna-ps2A0A140T8V5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
Pcna-ps2A0A140T8V5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcna-ps2A0A140T8V5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcna-ps2A0A140T8V5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcna-ps2A0A140T8V5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcna-ps2A0A140T8V5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcna-ps2A0A140T8V5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcna-ps2A0A140T8V5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.68■■□□□ 1.22
Pcna-ps2A0A140T8V5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcna-ps2A0A140T8V5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcna-ps2A0A140T8V5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.67■■□□□ 1.22
Pcna-ps2A0A140T8V5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcna-ps2A0A140T8V5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcna-ps2A0A140T8V5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcna-ps2A0A140T8V5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms