Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav13n-2A0A0G2JF93 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav13n-2A0A0G2JF93 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-2A0A0G2JF93 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-2A0A0G2JF93 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav13n-2A0A0G2JF93 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav13n-2A0A0G2JF93 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-2A0A0G2JF93 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-2A0A0G2JF93 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-2A0A0G2JF93 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-2A0A0G2JF93 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav13n-2A0A0G2JF93 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-2A0A0G2JF93 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav13n-2A0A0G2JF93 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-2A0A0G2JF93 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-2A0A0G2JF93 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-2A0A0G2JF93 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav13n-2A0A0G2JF93 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-2A0A0G2JF93 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav13n-2A0A0G2JF93 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Gm26115-201ENSMUST00000175605 87 ntBASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav13n-2A0A0G2JF93 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trav13n-2A0A0G2JF93 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-2A0A0G2JF93 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-2A0A0G2JF93 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav13n-2A0A0G2JF93 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-2A0A0G2JF93 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-2A0A0G2JF93 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-2A0A0G2JF93 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-2A0A0G2JF93 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-2A0A0G2JF93 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-2A0A0G2JF93 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Trav13n-2A0A0G2JF93 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav13n-2A0A0G2JF93 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Trav13n-2A0A0G2JF93 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-2A0A0G2JF93 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-2A0A0G2JF93 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-2A0A0G2JF93 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav13n-2A0A0G2JF93 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav13n-2A0A0G2JF93 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-2A0A0G2JF93 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-2A0A0G2JF93 Gm8109-201ENSMUST00000194076 746 ntBASIC15.08■□□□□ 0
Trav13n-2A0A0G2JF93 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trav13n-2A0A0G2JF93 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav13n-2A0A0G2JF93 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav13n-2A0A0G2JF93 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13n-2A0A0G2JF93 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-2A0A0G2JF93 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-2A0A0G2JF93 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.07■□□□□ 0
Trav13n-2A0A0G2JF93 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-2A0A0G2JF93 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav13n-2A0A0G2JF93 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav13n-2A0A0G2JF93 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.07■□□□□ 0
Trav13n-2A0A0G2JF93 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-2A0A0G2JF93 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-2A0A0G2JF93 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-2A0A0G2JF93 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-2A0A0G2JF93 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-2A0A0G2JF93 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-2A0A0G2JF93 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-2A0A0G2JF93 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-2A0A0G2JF93 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-2A0A0G2JF93 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-2A0A0G2JF93 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-2A0A0G2JF93 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-2A0A0G2JF93 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-2A0A0G2JF93 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-2A0A0G2JF93 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-2A0A0G2JF93 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Trav13n-2A0A0G2JF93 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.04■□□□□ -0
Trav13n-2A0A0G2JF93 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-2A0A0G2JF93 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-2A0A0G2JF93 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.04■□□□□ -0
Trav13n-2A0A0G2JF93 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-2A0A0G2JF93 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-2A0A0G2JF93 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-2A0A0G2JF93 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-2A0A0G2JF93 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms