Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-52A0A0A6YXC3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.44■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.44■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.44■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ighv1-52A0A0A6YXC3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-52A0A0A6YXC3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.42■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.41■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-52A0A0A6YXC3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.39■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Gm6311-201ENSMUST00000073790 878 ntBASIC17.37■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.37■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-52A0A0A6YXC3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.36■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-52A0A0A6YXC3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.36■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Gm9812-201ENSMUST00000061934 968 ntBASIC17.36■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.35■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Gm45364-201ENSMUST00000210883 159 ntBASIC17.35■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.34■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.34■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-52A0A0A6YXC3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-52A0A0A6YXC3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.33■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ighv1-52A0A0A6YXC3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.32■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-52A0A0A6YXC3 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.3■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.29■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv1-52A0A0A6YXC3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms