Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav12d-3A0A075B6A4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-3A0A075B6A4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-3A0A075B6A4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-3A0A075B6A4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-3A0A075B6A4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-3A0A075B6A4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-3A0A075B6A4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12d-3A0A075B6A4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12d-3A0A075B6A4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav12d-3A0A075B6A4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav12d-3A0A075B6A4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12d-3A0A075B6A4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12d-3A0A075B6A4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-3A0A075B6A4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav12d-3A0A075B6A4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-3A0A075B6A4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-3A0A075B6A4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-3A0A075B6A4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-3A0A075B6A4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-3A0A075B6A4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12d-3A0A075B6A4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav12d-3A0A075B6A4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav12d-3A0A075B6A4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav12d-3A0A075B6A4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12d-3A0A075B6A4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav12d-3A0A075B6A4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav12d-3A0A075B6A4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav12d-3A0A075B6A4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12d-3A0A075B6A4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12d-3A0A075B6A4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-3A0A075B6A4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-3A0A075B6A4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav12d-3A0A075B6A4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-3A0A075B6A4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav12d-3A0A075B6A4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-3A0A075B6A4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-3A0A075B6A4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-3A0A075B6A4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12d-3A0A075B6A4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trav12d-3A0A075B6A4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12d-3A0A075B6A4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.23■□□□□ 0.35
Trav12d-3A0A075B6A4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.23■□□□□ 0.35
Trav12d-3A0A075B6A4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12d-3A0A075B6A4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12d-3A0A075B6A4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12d-3A0A075B6A4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12d-3A0A075B6A4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12d-3A0A075B6A4 Gm25262-201ENSMUST00000174934 133 ntBASIC17.22■□□□□ 0.35
Trav12d-3A0A075B6A4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav12d-3A0A075B6A4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12d-3A0A075B6A4 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.22■□□□□ 0.35
Trav12d-3A0A075B6A4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav12d-3A0A075B6A4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-3A0A075B6A4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-3A0A075B6A4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav12d-3A0A075B6A4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-3A0A075B6A4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-3A0A075B6A4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12d-3A0A075B6A4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12d-3A0A075B6A4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav12d-3A0A075B6A4 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.2■□□□□ 0.34
Trav12d-3A0A075B6A4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav12d-3A0A075B6A4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-3A0A075B6A4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-3A0A075B6A4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-3A0A075B6A4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav12d-3A0A075B6A4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-3A0A075B6A4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trav12d-3A0A075B6A4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trav12d-3A0A075B6A4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12d-3A0A075B6A4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12d-3A0A075B6A4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12d-3A0A075B6A4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12d-3A0A075B6A4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12d-3A0A075B6A4 Notumos-201ENSMUST00000151998 2659 ntBASIC17.17■□□□□ 0.34
Trav12d-3A0A075B6A4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav12d-3A0A075B6A4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12d-3A0A075B6A4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12d-3A0A075B6A4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-3A0A075B6A4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-3A0A075B6A4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.16■□□□□ 0.34
Trav12d-3A0A075B6A4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-3A0A075B6A4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-3A0A075B6A4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav12d-3A0A075B6A4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-3A0A075B6A4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-3A0A075B6A4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-3A0A075B6A4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-3A0A075B6A4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav12d-3A0A075B6A4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-3A0A075B6A4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Trav12d-3A0A075B6A4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-3A0A075B6A4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav12d-3A0A075B6A4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav12d-3A0A075B6A4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-3A0A075B6A4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Trav12d-3A0A075B6A4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-3A0A075B6A4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-3A0A075B6A4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 186.4 ms