Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13-1A0A075B644 Mir6538-201ENSMUST00000183713 110 ntBASIC16.21■□□□□ 0.19
Trav13-1A0A075B644 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13-1A0A075B644 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
Trav13-1A0A075B644 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13-1A0A075B644 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13-1A0A075B644 Gm11175-201ENSMUST00000116172 543 ntBASIC16.2■□□□□ 0.18
Trav13-1A0A075B644 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13-1A0A075B644 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13-1A0A075B644 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-1A0A075B644 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13-1A0A075B644 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav13-1A0A075B644 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13-1A0A075B644 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13-1A0A075B644 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13-1A0A075B644 Mir3960-201ENSMUST00000198213 73 ntBASIC16.18■□□□□ 0.18
Trav13-1A0A075B644 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.18■□□□□ 0.18
Trav13-1A0A075B644 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13-1A0A075B644 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav13-1A0A075B644 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13-1A0A075B644 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-1A0A075B644 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-1A0A075B644 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav13-1A0A075B644 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-1A0A075B644 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav13-1A0A075B644 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13-1A0A075B644 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.16■□□□□ 0.18
Trav13-1A0A075B644 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav13-1A0A075B644 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13-1A0A075B644 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13-1A0A075B644 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav13-1A0A075B644 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13-1A0A075B644 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13-1A0A075B644 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav13-1A0A075B644 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-1A0A075B644 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-1A0A075B644 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-1A0A075B644 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-1A0A075B644 Scarna2-201ENSMUST00000157560 414 ntBASIC16.12■□□□□ 0.17
Trav13-1A0A075B644 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-1A0A075B644 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav13-1A0A075B644 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav13-1A0A075B644 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13-1A0A075B644 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav13-1A0A075B644 Gm11687-201ENSMUST00000118911 886 ntBASIC16.11■□□□□ 0.17
Trav13-1A0A075B644 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav13-1A0A075B644 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13-1A0A075B644 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13-1A0A075B644 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Gm45364-201ENSMUST00000210883 159 ntBASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Gm9806-201ENSMUST00000051080 552 ntBASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.1■□□□□ 0.17
Trav13-1A0A075B644 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-1A0A075B644 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-1A0A075B644 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-1A0A075B644 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-1A0A075B644 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-1A0A075B644 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.09■□□□□ 0.17
Trav13-1A0A075B644 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13-1A0A075B644 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13-1A0A075B644 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13-1A0A075B644 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav13-1A0A075B644 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13-1A0A075B644 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13-1A0A075B644 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav13-1A0A075B644 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13-1A0A075B644 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13-1A0A075B644 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13-1A0A075B644 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 Gm16437-201ENSMUST00000025669 507 ntBASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav13-1A0A075B644 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trav13-1A0A075B644 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-1A0A075B644 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav13-1A0A075B644 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-1A0A075B644 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-1A0A075B644 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-1A0A075B644 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-1A0A075B644 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13-1A0A075B644 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Trav13-1A0A075B644 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.04■□□□□ 0.16
Trav13-1A0A075B644 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13-1A0A075B644 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav13-1A0A075B644 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13-1A0A075B644 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms