Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4d-3A0A075B625 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4d-3A0A075B625 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav4d-3A0A075B625 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4d-3A0A075B625 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav4d-3A0A075B625 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4d-3A0A075B625 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4d-3A0A075B625 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4d-3A0A075B625 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4d-3A0A075B625 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4d-3A0A075B625 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4d-3A0A075B625 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4d-3A0A075B625 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4d-3A0A075B625 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4d-3A0A075B625 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav4d-3A0A075B625 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.64■□□□□ 0.09
Trav4d-3A0A075B625 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4d-3A0A075B625 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4d-3A0A075B625 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav4d-3A0A075B625 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4d-3A0A075B625 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4d-3A0A075B625 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Trav4d-3A0A075B625 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4d-3A0A075B625 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4d-3A0A075B625 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4d-3A0A075B625 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4d-3A0A075B625 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4d-3A0A075B625 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4d-3A0A075B625 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4d-3A0A075B625 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav4d-3A0A075B625 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4d-3A0A075B625 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav4d-3A0A075B625 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4d-3A0A075B625 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4d-3A0A075B625 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4d-3A0A075B625 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav4d-3A0A075B625 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4d-3A0A075B625 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4d-3A0A075B625 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav4d-3A0A075B625 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav4d-3A0A075B625 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav4d-3A0A075B625 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav4d-3A0A075B625 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.58■□□□□ 0.09
Trav4d-3A0A075B625 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Trav4d-3A0A075B625 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav4d-3A0A075B625 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4d-3A0A075B625 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4d-3A0A075B625 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Trav4d-3A0A075B625 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4d-3A0A075B625 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4d-3A0A075B625 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav4d-3A0A075B625 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Trav4d-3A0A075B625 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4d-3A0A075B625 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4d-3A0A075B625 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav4d-3A0A075B625 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4d-3A0A075B625 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.57■□□□□ 0.08
Trav4d-3A0A075B625 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4d-3A0A075B625 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav4d-3A0A075B625 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.56■□□□□ 0.08
Trav4d-3A0A075B625 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4d-3A0A075B625 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4d-3A0A075B625 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4d-3A0A075B625 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4d-3A0A075B625 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav4d-3A0A075B625 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav4d-3A0A075B625 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Trav4d-3A0A075B625 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4d-3A0A075B625 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4d-3A0A075B625 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav4d-3A0A075B625 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4d-3A0A075B625 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4d-3A0A075B625 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4d-3A0A075B625 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav4d-3A0A075B625 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4d-3A0A075B625 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4d-3A0A075B625 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4d-3A0A075B625 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4d-3A0A075B625 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav4d-3A0A075B625 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms