Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav10nA0A075B622 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trav10nA0A075B622 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.33■□□□□ 0.84
Trav10nA0A075B622 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trav10nA0A075B622 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav10nA0A075B622 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trav10nA0A075B622 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav10nA0A075B622 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav10nA0A075B622 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav10nA0A075B622 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav10nA0A075B622 Gm7432-201ENSMUST00000210343 879 ntBASIC20.3■□□□□ 0.84
Trav10nA0A075B622 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav10nA0A075B622 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav10nA0A075B622 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav10nA0A075B622 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav10nA0A075B622 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav10nA0A075B622 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav10nA0A075B622 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav10nA0A075B622 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav10nA0A075B622 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav10nA0A075B622 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav10nA0A075B622 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav10nA0A075B622 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav10nA0A075B622 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav10nA0A075B622 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav10nA0A075B622 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trav10nA0A075B622 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trav10nA0A075B622 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav10nA0A075B622 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trav10nA0A075B622 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Trav10nA0A075B622 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav10nA0A075B622 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav10nA0A075B622 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.25■□□□□ 0.83
Trav10nA0A075B622 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav10nA0A075B622 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trav10nA0A075B622 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.25■□□□□ 0.83
Trav10nA0A075B622 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav10nA0A075B622 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trav10nA0A075B622 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav10nA0A075B622 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.24■□□□□ 0.83
Trav10nA0A075B622 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav10nA0A075B622 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav10nA0A075B622 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trav10nA0A075B622 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav10nA0A075B622 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Trav10nA0A075B622 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav10nA0A075B622 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav10nA0A075B622 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav10nA0A075B622 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav10nA0A075B622 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav10nA0A075B622 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.22■□□□□ 0.83
Trav10nA0A075B622 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trav10nA0A075B622 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav10nA0A075B622 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav10nA0A075B622 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav10nA0A075B622 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.21■□□□□ 0.83
Trav10nA0A075B622 Gm11599-201ENSMUST00000118720 878 ntBASIC20.21■□□□□ 0.83
Trav10nA0A075B622 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav10nA0A075B622 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav10nA0A075B622 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav10nA0A075B622 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Trav10nA0A075B622 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav10nA0A075B622 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav10nA0A075B622 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav10nA0A075B622 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav10nA0A075B622 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav10nA0A075B622 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav10nA0A075B622 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav10nA0A075B622 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.19■□□□□ 0.82
Trav10nA0A075B622 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trav10nA0A075B622 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav10nA0A075B622 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav10nA0A075B622 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav10nA0A075B622 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trav10nA0A075B622 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav10nA0A075B622 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.18■□□□□ 0.82
Trav10nA0A075B622 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trav10nA0A075B622 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav10nA0A075B622 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav10nA0A075B622 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav10nA0A075B622 Gm4799-201ENSMUST00000095396 657 ntBASIC20.16■□□□□ 0.82
Trav10nA0A075B622 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav10nA0A075B622 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav10nA0A075B622 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trav10nA0A075B622 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trav10nA0A075B622 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav10nA0A075B622 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.13■□□□□ 0.81
Trav10nA0A075B622 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav10nA0A075B622 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trav10nA0A075B622 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trav10nA0A075B622 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trav10nA0A075B622 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav10nA0A075B622 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav10nA0A075B622 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav10nA0A075B622 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav10nA0A075B622 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trav10nA0A075B622 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav10nA0A075B622 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav10nA0A075B622 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trav10nA0A075B622 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms