Protein–RNA interactions for Protein: A0A075B5T0

Ighv3-8, Immunoglobulin heavy variable V3-8 (Fragment), mousemouse

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-8A0A075B5T0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-8A0A075B5T0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-8A0A075B5T0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-8A0A075B5T0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv3-8A0A075B5T0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-8A0A075B5T0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-8A0A075B5T0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-8A0A075B5T0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-8A0A075B5T0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ighv3-8A0A075B5T0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv3-8A0A075B5T0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-8A0A075B5T0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-8A0A075B5T0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ighv3-8A0A075B5T0 Gm8503-201ENSMUST00000118131 455 ntBASIC17.22■□□□□ 0.35
Ighv3-8A0A075B5T0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-8A0A075B5T0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Ighv3-8A0A075B5T0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv3-8A0A075B5T0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Ighv3-8A0A075B5T0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-8A0A075B5T0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-8A0A075B5T0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-8A0A075B5T0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv3-8A0A075B5T0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ighv3-8A0A075B5T0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ighv3-8A0A075B5T0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv3-8A0A075B5T0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv3-8A0A075B5T0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv3-8A0A075B5T0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv3-8A0A075B5T0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-8A0A075B5T0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-8A0A075B5T0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-8A0A075B5T0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv3-8A0A075B5T0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ighv3-8A0A075B5T0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv3-8A0A075B5T0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv3-8A0A075B5T0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv3-8A0A075B5T0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv3-8A0A075B5T0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv3-8A0A075B5T0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv3-8A0A075B5T0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv3-8A0A075B5T0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv3-8A0A075B5T0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv3-8A0A075B5T0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv3-8A0A075B5T0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv3-8A0A075B5T0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv3-8A0A075B5T0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv3-8A0A075B5T0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ighv3-8A0A075B5T0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv3-8A0A075B5T0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv3-8A0A075B5T0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.14■□□□□ 0.33
Ighv3-8A0A075B5T0 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.14■□□□□ 0.33
Ighv3-8A0A075B5T0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv3-8A0A075B5T0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv3-8A0A075B5T0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv3-8A0A075B5T0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv3-8A0A075B5T0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv3-8A0A075B5T0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv3-8A0A075B5T0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv3-8A0A075B5T0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv3-8A0A075B5T0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv3-8A0A075B5T0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-8A0A075B5T0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-8A0A075B5T0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-8A0A075B5T0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-8A0A075B5T0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-8A0A075B5T0 Gm37136-201ENSMUST00000194368 194 ntBASIC17.11■□□□□ 0.33
Ighv3-8A0A075B5T0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ighv3-8A0A075B5T0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv3-8A0A075B5T0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.1■□□□□ 0.33
Ighv3-8A0A075B5T0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv3-8A0A075B5T0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv3-8A0A075B5T0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv3-8A0A075B5T0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv3-8A0A075B5T0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ighv3-8A0A075B5T0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv3-8A0A075B5T0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.1■□□□□ 0.33
Ighv3-8A0A075B5T0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.09■□□□□ 0.33
Ighv3-8A0A075B5T0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv3-8A0A075B5T0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv3-8A0A075B5T0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Ighv3-8A0A075B5T0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv3-8A0A075B5T0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv3-8A0A075B5T0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv3-8A0A075B5T0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv3-8A0A075B5T0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv3-8A0A075B5T0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ighv3-8A0A075B5T0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv3-8A0A075B5T0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv3-8A0A075B5T0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ighv3-8A0A075B5T0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.07■□□□□ 0.32
Ighv3-8A0A075B5T0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv3-8A0A075B5T0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv3-8A0A075B5T0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv3-8A0A075B5T0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv3-8A0A075B5T0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
Ighv3-8A0A075B5T0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv3-8A0A075B5T0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv3-8A0A075B5T0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv3-8A0A075B5T0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.05■□□□□ 0.32
Ighv3-8A0A075B5T0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms