RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 EMX1Q04741 257 aaPredicted RBP13.52□□□□□ -0.24
PHGDH-233ENST00000642021 VAC14Q08AM6 782 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 CDK5R2Q13319 367 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 RAPSNQ13702 412 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 USP39Q53GS9 565 aaKnown RBP13.52□□□□□ -0.24
PHGDH-233ENST00000642021 ZNF691Q5VV52 312 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 GRAMD4Q6IC98 578 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 CCDC80Q76M96 950 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 TRIM46Q7Z4K8 759 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 GALNT5Q7Z7M9 940 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 SNX29P2Q8IUI4 249 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 SVOPLQ8N434 492 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 SH3YL1Q96HL8 342 aaPredicted RBP13.52□□□□□ -0.24
PHGDH-233ENST00000642021 NODALQ96S42 347 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 SERHLQ9NQF3 203 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 WWOXQ9NZC7 414 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 PCDHB1Q9Y5F3 818 aa13.52□□□□□ -0.24
PHGDH-233ENST00000642021 A8MX80 341 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 MANBAO00462 879 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 FTH1P02794 183 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 ZNF7P17097 686 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-233ENST00000642021 CD6P30203 668 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 GKP32189 559 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 NRIP1P48552 1158 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 PHEXP78562 749 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 CES5AQ6NT32 575 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 FUT10Q6P4F1 479 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 CYP4Z1Q86W10 505 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 OR5K1Q8NHB7 308 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 PIH1D2Q8WWB5 315 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 MAGED4Q96JG8 741 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 TTLL2Q9BWV7 592 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 FAM126AQ9BYI3 521 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-233ENST00000642021 TM6SF2Q9BZW4 377 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 ASB8Q9H765 288 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 ENPP5Q9UJA9 477 aa13.52□□□□□ -0.25
PHGDH-233ENST00000642021 SERPINB7O75635 380 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 ALDH2P05091 517 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 TACR1P25103 407 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 CDKN2CP42773 168 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 GABARAPL2P60520 117 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 KCNC4Q03721 635 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 EPS8Q12929 822 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 SLC14A1Q13336 389 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 CPSF6Q16630 551 aaKnown RBP eCLIP13.51□□□□□ -0.25
PHGDH-233ENST00000642021 CARD16Q5EG05 197 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 ADGRF1Q5T601 910 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 CALHM3Q86XJ0 350 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 ADHFE1Q8IWW8 467 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 EID3Q8N140 333 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 ZBTB8BQ8NAP8 495 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-233ENST00000642021 OR52E4Q8NGH9 312 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 BHMTQ93088 406 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 RHNO1Q9BSD3 238 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 PALMDQ9NP74 551 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 IL26Q9NPH9 171 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 C3orf18Q9UK00 162 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 NAALAD2Q9Y3Q0 740 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 SLC28A1O00337 649 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 RETP07949 1114 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 EPORP19235 508 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 NEK2P51955 445 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 RAD23AP54725 363 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 RHOAP61586 193 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 SEMG2Q02383 582 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 GSTM4Q03013 218 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 CD300CQ08708 224 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 SIM2Q14190 667 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-233ENST00000642021 RGS21Q2M5E4 152 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 ZXDCQ2QGD7 858 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-233ENST00000642021 CACHD1Q5VU97 1274 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 ADGRG2Q8IZP9 1017 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 PARP8Q8N3A8 854 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 ZCCHC7Q8N3Z6 543 aaKnown RBP13.51□□□□□ -0.25
PHGDH-233ENST00000642021 GLB1L3Q8NCI6 653 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-233ENST00000642021 BCL7CQ8WUZ0 217 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-233ENST00000642021 FAR1Q8WVX9 515 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 ALOXE3Q9BYJ1 711 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 ACPTQ9BZG2 426 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 RABL2BQ9UNT1 228 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 PLXNA4Q9HCM2 1894 aa13.51□□□□□ -0.25
PHGDH-233ENST00000642021 C2orf78A6NCI8 922 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 MANSC4A6NHS7 340 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-233ENST00000642021 GOLGA8CPA6NN73 597 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 SLC16A6O15403 523 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 ADAM23O75077 832 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 NDUFS2O75306 463 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 UGT2B11O75310 529 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 CLDN7O95471 211 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 CYP4B1P13584 511 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 ITIH1P19827 911 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 PTPN6P29350 595 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 MAP2K4P45985 399 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 RAB15P59190 212 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 LSM3P62310 102 aaKnown RBP13.5□□□□□ -0.25
PHGDH-233ENST00000642021 CAP1Q01518 475 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 NFATC2Q13469 925 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 HECTD3Q5T447 861 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 GPRC6AQ5T6X5 926 aa13.5□□□□□ -0.25
PHGDH-233ENST00000642021 CERS6Q6ZMG9 384 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms