RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 SERPINA9Q86WD7 417 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 SNX32Q86XE0 403 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 DEFB107AQ8IZN7 70 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 RBFAQ8N0V3 343 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 FBXW8Q8N3Y1 598 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 SDR16C5Q8N3Y7 309 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 OR13H1Q8NG92 308 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 GIMAP7Q8NHV1 300 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 ZNF483Q8TF39 744 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-224ENST00000641711 JADE3Q92613 823 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 KLK6Q92876 244 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 STMN2Q93045 179 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 CLPTM1LQ96KA5 538 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 CATSPER2Q96P56 530 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 VPS35Q96QK1 796 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 SLC30A3Q99726 388 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 TEX101Q9BY14 249 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 ABCG8Q9H221 673 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 IL26Q9NPH9 171 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 UTP6Q9NYH9 597 aaKnown RBP10.04□□□□□ -0.8
PHGDH-224ENST00000641711 KLHL42Q9P2K6 505 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 GALPQ9UBC7 116 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 RAPGEFL1Q9UHV5 662 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 COQ6Q9Y2Z9 468 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 PCDHGB2Q9Y5G2 931 aa10.04□□□□□ -0.8
PHGDH-224ENST00000641711 PLXNB3Q9ULL4 1909 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 TDRD6O60522 2096 aaKnown RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 A0A1B0GVT2 93 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 LNP1A1A4G5 178 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 POM121BA6NF01 834 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 SUPT3HB4E1H0 165 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 H3BM21 787 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 CDC7O00311 574 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 AZIN1O14977 448 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 UBDO15205 165 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 RAD51BO15315 384 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 VPS4BO75351 444 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 SUPT3HO75486 399 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 PRAMEF1O95521 474 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 MLYCDO95822 493 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 WNT1P04628 370 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 PCCBP05166 539 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 BPIP17213 487 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 SDHBP21912 280 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 GPR1P46091 355 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 PTDSS1P48651 473 aaKnown RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 MRPL19P49406 292 aaKnown RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 CSNK1EP49674 416 aaKnown RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 ACADVLP49748 655 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 CCT8P50990 548 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 ATXN3P54252 364 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 CLCQ05315 142 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 TBL3Q12788 808 aaKnown RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 SLC14A1Q13336 389 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 NFATC2Q13469 925 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 INAVAQ3KP66 663 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 Q6ZSR6 202 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 EFL1Q7Z2Z2 1120 aaKnown RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 GPSM1Q86YR5 675 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 PHYKPLQ8IUZ5 450 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 DSELQ8IZU8 1212 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 PGAM4Q8N0Y7 254 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 CHCHD4Q8N4Q1 142 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 SIDT2Q8NBJ9 832 aaKnown RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 BTN2A2Q8WVV5 523 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 C19orf60Q96EN9 201 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 LINGO1Q96FE5 620 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 BMFQ96LC9 184 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 PPP1R36Q96LQ0 422 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 WDR92Q96MX6 357 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 PHOX2BQ99453 314 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 SERPINI1Q99574 410 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 ELF4Q99607 663 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 APOOQ9BUR5 198 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 EDEM2Q9BV94 578 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 ZCCHC2Q9C0B9 1178 aaKnown RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 EFCAB1Q9HAE3 211 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 MID1IP1Q9NPA3 183 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 PARD6AQ9NPB6 346 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 FZD3Q9NPG1 666 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 TMEM9BQ9NQ34 198 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 LATS2Q9NRM7 1088 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 DNAAF2Q9NVR5 837 aaKnown RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 NUDT4Q9NZJ9 180 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 MCM8Q9UJA3 840 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 GNPTGQ9UJJ9 305 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 ANGPTL2Q9UKU9 493 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 PCNX2A6NKB5 2137 aa10.03□□□□□ -0.8
PHGDH-224ENST00000641711 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-224ENST00000641711 ARHGEF17Q96PE2 2063 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-224ENST00000641711 GLYATL1P3A0A0U1RQE8 302 aa10.02□□□□□ -0.81
PHGDH-224ENST00000641711 A0A1B0GTQ1 180 aa10.02□□□□□ -0.81
PHGDH-224ENST00000641711 KLHL33A6NCF5 533 aa10.02□□□□□ -0.81
PHGDH-224ENST00000641711 NPEPPSL1A6NEC2 478 aa10.02□□□□□ -0.81
PHGDH-224ENST00000641711 A8MX80 341 aa10.02□□□□□ -0.81
PHGDH-224ENST00000641711 E5RI56 91 aa10.02□□□□□ -0.81
PHGDH-224ENST00000641711 H0Y3Z8 333 aa10.02□□□□□ -0.81
PHGDH-224ENST00000641711 BTN3A1O00481 513 aa10.02□□□□□ -0.81
PHGDH-224ENST00000641711 PCDHGA12O60330 932 aa10.02□□□□□ -0.81
PHGDH-224ENST00000641711 GPC4O75487 556 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms