RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 EPHX4Q8IUS5 362 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 CLHC1Q8NHS4 586 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 ASZ1Q8WWH4 475 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 GTF2H4Q92759 462 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 BIRC7Q96CA5 298 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 CENPNQ96H22 339 aaPredicted RBP20.98■□□□□ 0.95
CLN6-224ENST00000638076 ATG10Q9H0Y0 220 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 ELOVL6Q9H5J4 265 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 CLMPQ9H6B4 373 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 ANAPC2Q9UJX6 822 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 SNX6Q9UNH7 406 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 KCNE1BA0A087WTH5 132 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 KANSL1LA0AUZ9 987 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 TMEM202A6NGA9 273 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 PDLIM1O00151 329 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 DFNA5O60443 496 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 FTH1P02794 183 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 CYP17A1P05093 508 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 PGRP06401 933 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 CISD3P0C7P0 127 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 BCKDHAP12694 445 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 TXNL4AP83876 142 aaKnown RBP20.98■□□□□ 0.95
CLN6-224ENST00000638076 UBE3AQ05086 875 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 INTS11Q5TA45 600 aaKnown RBP20.98■□□□□ 0.95
CLN6-224ENST00000638076 DPPA4Q7L190 304 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 C12orf40Q86WS4 652 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 GALNT13Q8IUC8 556 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 CBR4Q8N4T8 237 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 OR8J3Q8NGG0 315 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 ITFG1Q8TB96 612 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 TIFAQ96CG3 184 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 ZNF696Q9H7X3 374 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 RAD18Q9NS91 495 aa20.98■□□□□ 0.95
CLN6-224ENST00000638076 DUS2Q9NX74 493 aaKnown RBP20.98■□□□□ 0.95
CLN6-224ENST00000638076 MYOCOSA0A1B0GUC4 107 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 ZNF197O14709 1029 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 ARHGEF15O94989 841 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 IL6P05231 212 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 CCT8P50990 548 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 AP1S2P56377 157 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 ZNF284Q2VY69 593 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 NEK10Q6ZWH5 1172 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 TECPR1Q7Z6L1 1165 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 ZNF707Q96C28 371 aaPredicted RBP20.97■□□□□ 0.95
CLN6-224ENST00000638076 PRPF18Q99633 342 aaKnown RBP20.97■□□□□ 0.95
CLN6-224ENST00000638076 DKK3Q9UBP4 350 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 MAGEL2Q9UJ55 1249 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 V9GYQ6 96 aa20.97■□□□□ 0.95
CLN6-224ENST00000638076 ZFC3H1O60293 1989 aaKnown RBP20.97■□□□□ 0.95
CLN6-224ENST00000638076 SRPRAP08240 638 aaKnown RBP20.96■□□□□ 0.95
CLN6-224ENST00000638076 ADH5P11766 374 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 FCGR1AP12314 374 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 GRIN2CQ14957 1233 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 PSRC1Q6PGN9 363 aaPredicted RBP20.96■□□□□ 0.95
CLN6-224ENST00000638076 L3MBTL4Q8NA19 623 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 BTN2A2Q8WVV5 523 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 LRIG1Q96JA1 1093 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 NSMCE2Q96MF7 247 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 SEPHS2Q99611 448 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 DNAJC11Q9NVH1 559 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 NFKBIL1Q9UBC1 381 aaPredicted RBP20.96■□□□□ 0.95
CLN6-224ENST00000638076 PLXNA2O75051 1894 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 SLCO2B1O94956 709 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 ELFN1P0C7U0 828 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 MMP12P39900 470 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 NHSL2Q5HYW2 709 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 SATL1Q86VE3 508 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 CARM1Q86X55 608 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 RAVER1Q8IY67 606 aaKnown RBP20.96■□□□□ 0.95
CLN6-224ENST00000638076 DTWD1Q8N5C7 304 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 CELF5Q8N6W0 485 aaKnown RBP20.96■□□□□ 0.95
CLN6-224ENST00000638076 PAPD5Q8NDF8 572 aaKnown RBP20.96■□□□□ 0.95
CLN6-224ENST00000638076 ITM2BQ9Y287 266 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 DLGAP4Q9Y2H0 992 aa20.96■□□□□ 0.95
CLN6-224ENST00000638076 TSPAN6O43657 245 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 PRAMEF4O60810 478 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 CLPTM1O96005 669 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 PLOD1Q02809 727 aaPredicted RBP20.95■□□□□ 0.94
CLN6-224ENST00000638076 ACOX1Q15067 660 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 PRAMEF9Q5VWM5 478 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 LIPIQ6XZB0 460 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 PARS2Q7L3T8 475 aaKnown RBP20.95■□□□□ 0.94
CLN6-224ENST00000638076 RBM23Q86U06 439 aaKnown RBP20.95■□□□□ 0.94
CLN6-224ENST00000638076 PACRGLQ8N7B6 248 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 ZNF583Q96ND8 569 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 C9orf16Q9BUW7 83 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.95■□□□□ 0.94
CLN6-224ENST00000638076 OAZ3Q9UMX2 235 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 ASLP04424 464 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 PABPC4LP0CB38 370 aaKnown RBP20.95■□□□□ 0.94
CLN6-224ENST00000638076 CLCN2P51788 898 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 CTSCP53634 463 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 PFN3P60673 137 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 ST8SIA6P61647 398 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 RPS14P62263 151 aaKnown RBP20.95■□□□□ 0.94
CLN6-224ENST00000638076 ABRQ12979 859 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 TBC1D21Q8IYX1 336 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 RASGEF1AQ8N9B8 481 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 GLYATL1Q969I3 302 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 RSPRY1Q96DX4 576 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms