RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 KDM1AO60341 852 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 CD63P08962 238 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 ADRA1DP25100 572 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 PEBP1P30086 187 aaKnown RBP17.8■□□□□ 0.44
CLN6-220ENST00000637450 OTX2P32243 289 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 CCR7P32248 378 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 FDFT1P37268 417 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 GRIA1P42261 906 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 DCDP81605 110 aaKnown RBP17.8■□□□□ 0.44
CLN6-220ENST00000637450 ACVR1Q04771 509 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 KIR2DS3Q14952 304 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 DNAJC21Q5F1R6 531 aaKnown RBP17.8■□□□□ 0.44
CLN6-220ENST00000637450 C1orf189Q5VU69 101 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 AFTPHQ6ULP2 937 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 ZNF534Q76KX8 674 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 RBMXL3Q8N7X1 1067 aaKnown RBP17.8■□□□□ 0.44
CLN6-220ENST00000637450 Q8NA96 180 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 OR4L1Q8NH43 312 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 SGSM3Q96HU1 749 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 ZNF778Q96MU6 729 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 DESI2Q9BSY9 194 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 MFRPQ9BY79 579 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 IMPACTQ9P2X3 320 aa17.8■□□□□ 0.44
CLN6-220ENST00000637450 ISM1B1AKI9 464 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 F8W8V4 182 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 ZSCAN9O15535 394 aaPredicted RBP17.79■□□□□ 0.44
CLN6-220ENST00000637450 KYNUQ16719 465 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 FHL5Q5TD97 284 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 TLDC1Q6P9B6 456 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 PPP1R21Q6ZMI0 780 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 NLRP9Q7RTR0 991 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 MRGPREQ86SM8 312 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 SLC22A15Q8IZD6 547 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 ZNF655Q8N720 491 aaPredicted RBP17.79■□□□□ 0.44
CLN6-220ENST00000637450 OR6P1Q8NGX9 317 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 PNPLA2Q96AD5 504 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 CARD6Q9BX69 1037 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 AP1M1Q9BXS5 423 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 FRMD8P1Q9BZ68 369 aaPredicted RBP17.79■□□□□ 0.44
CLN6-220ENST00000637450 LRRC4CQ9HCJ2 640 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 SLAMF7Q9NQ25 335 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 CASS4Q9NQ75 786 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 C5AR2Q9P296 337 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 IFT80Q9P2H3 777 aaPredicted RBP17.79■□□□□ 0.44
CLN6-220ENST00000637450 DHCR7Q9UBM7 475 aaKnown RBP17.79■□□□□ 0.44
CLN6-220ENST00000637450 GPN3Q9UHW5 284 aaPredicted RBP17.79■□□□□ 0.44
CLN6-220ENST00000637450 SRPK3Q9UPE1 567 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 PLCL2Q9UPR0 1127 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 CDYLQ9Y232 598 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 PTRH2Q9Y3E5 179 aaKnown RBP17.79■□□□□ 0.44
CLN6-220ENST00000637450 CAPN6Q9Y6Q1 641 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 PIKFYVEQ9Y2I7 2098 aa17.79■□□□□ 0.44
CLN6-220ENST00000637450 SPTBN1Q01082 2364 aaKnown RBP17.78■□□□□ 0.44
CLN6-220ENST00000637450 GPC4O75487 556 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 IFNB1P01574 187 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 PKLRP30613 574 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 FOLR3P41439 243 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 RAB28P51157 221 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 CSE1LP55060 971 aaKnown RBP17.78■□□□□ 0.44
CLN6-220ENST00000637450 RAPSNQ13702 412 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 SLC6A19Q695T7 634 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 MRPL14Q6P1L8 145 aaKnown RBP17.78■□□□□ 0.44
CLN6-220ENST00000637450 VRK3Q8IV63 474 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 RNF10Q8N5U6 811 aaKnown RBP17.78■□□□□ 0.44
CLN6-220ENST00000637450 OR2Y1Q8NGV0 311 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 FER1L6-AS2Q96M78 137 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 MENTQ9BUN1 341 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 LUZP4Q9P127 313 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 ZNF148Q9UQR1 794 aa17.78■□□□□ 0.44
CLN6-220ENST00000637450 E7EVH7 732 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 CNOT3O75175 753 aaKnown RBP17.77■□□□□ 0.44
CLN6-220ENST00000637450 AGFG2O95081 481 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 IGHEP01854 428 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 VARSP26640 1264 aaKnown RBP17.77■□□□□ 0.44
CLN6-220ENST00000637450 PPARGP37231 505 aaPredicted RBP17.77■□□□□ 0.44
CLN6-220ENST00000637450 GCGRP47871 477 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 HSPA14Q0VDF9 509 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 SEMA3AQ14563 771 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 NKAIN1Q4KMZ8 207 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 FASTKD1Q53R41 847 aaKnown RBP17.77■□□□□ 0.44
CLN6-220ENST00000637450 PRR30Q53SZ7 412 aaPredicted RBP17.77■□□□□ 0.44
CLN6-220ENST00000637450 DCAF10Q5QP82 559 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 VWA5B1Q5TIE3 1220 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 PRUNE1Q86TP1 453 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 FAM20CQ8IXL6 584 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 LINC01555Q8NAE3 123 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 ASZ1Q8WWH4 475 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 PEX13Q92968 403 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 PTERQ96BW5 349 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 TSSK1BQ9BXA7 367 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 RAB6BQ9NRW1 208 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 TXLNGQ9NUQ3 528 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 EURLQ9NYK6 297 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 NDOR1Q9UHB4 597 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 TCAF1Q9Y4C2 921 aa17.77■□□□□ 0.44
CLN6-220ENST00000637450 PCSK5Q92824 1860 aa17.77■□□□□ 0.43
CLN6-220ENST00000637450 IQCF5A8MTL0 148 aa17.76■□□□□ 0.43
CLN6-220ENST00000637450 PEX12O00623 359 aa17.76■□□□□ 0.43
CLN6-220ENST00000637450 ETS1P14921 441 aa17.76■□□□□ 0.43
CLN6-220ENST00000637450 MAGP20916 626 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms