RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 PTGR1Q14914 329 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 PLEKHG6Q3KR16 790 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 GGTA1PQ4G0N0 100 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 PYCR3Q53H96 274 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 RUNDC3AQ59EK9 446 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SGO1Q5FBB7 561 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SPANXN4Q5MJ08 99 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 OTUD3Q5T2D3 398 aaPredicted RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 TTC23Q5W5X9 447 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 TMEM214Q6NUQ4 689 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 ZNF773Q6PK81 442 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 TBPL2Q6SJ96 375 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 TPRG1Q6ZUI0 275 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 USP45Q70EL2 814 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 STK32CQ86UX6 486 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 GPR180Q86V85 440 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 ZDHHC13Q8IUH4 622 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SLC39A11Q8N1S5 342 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 OR2AP1Q8NGE2 309 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 OR10A6Q8NH74 314 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 B4GALNT2Q8NHY0 566 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 FIBINQ8TAL6 211 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 GAB3Q8WWW8 586 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 FIG4Q92562 907 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 MRPS31Q92665 395 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 BHMTQ93088 406 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 FAM162AQ96A26 154 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 C12orf43Q96C57 262 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 SLC47A1Q96FL8 570 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 ASIC4Q96FT7 647 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 AURKBQ96GD4 344 aaPredicted RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 MAGEB10Q96LZ2 347 aaPredicted RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 OR52E6Q96RD3 313 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 COPS8Q99627 209 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 DOK1Q99704 481 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 ING2Q9H160 280 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SLC32A1Q9H598 525 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 MAGIXQ9H6Y5 334 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 RMND5AQ9H871 391 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 ACTR8Q9H981 624 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 POLR1BQ9H9Y6 1135 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 CXorf21Q9HAI6 301 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 IL21Q9HBE4 155 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 ZFP14Q9HCL3 533 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 MRPL17Q9NRX2 175 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 FARSBQ9NSD9 589 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 USE1Q9NZ43 259 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 IFT80Q9P2H3 777 aaPredicted RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 ADGRE2Q9UHX3 823 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SNX6Q9UNH7 406 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 INVSQ9Y283 1065 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 MAN2B2Q9Y2E5 1009 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SH3BP1Q9Y3L3 701 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 HTTP42858 3142 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 KLHL33A6NCF5 533 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 NPIPB15A6NHN6 443 aaPredicted RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 G3V2T6 193 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 RECQL5O94762 991 aaPredicted RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 OR56A5P0C7T3 313 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 MPC1LP0DKB6 136 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 BCKDHAP12694 445 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 JUNBP17275 347 aaPredicted RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 IL1RNP18510 177 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 PRPH2P23942 346 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 DCKP27707 260 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 S100A3P33764 101 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 GGT5P36269 586 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 GDF5P43026 501 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 HNRNPFP52597 415 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 CCL23P55773 120 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 RPS14P62263 151 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 SLC7A9P82251 487 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 PLIN5Q00G26 463 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SP140Q13342 867 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 RAB39AQ14964 217 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 USP39Q53GS9 565 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 RBM48Q5RL73 367 aaKnown RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 BROXQ5VW32 411 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 TXNDC8Q6A555 127 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 CRTC1Q6UUV9 634 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.88□□□□□ -1.154e-8■■■■□ 19.3
GPC3-204ENST00000631057 MSANTD1Q6ZTZ1 278 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 KCTD8Q6ZWB6 473 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 HTR3DQ70Z44 454 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 UBE2R2Q712K3 238 aaPredicted RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 THAP5Q7Z6K1 395 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 DEFB128Q7Z7B8 93 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 GPR149Q86SP6 731 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 CROCCP3Q8IVE0 287 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 ADHFE1Q8IWW8 467 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 ADGRG2Q8IZP9 1017 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 C8orf59Q8N0T1 100 aaPredicted RBP7.88□□□□□ -1.15
GPC3-204ENST00000631057 TMEM132CQ8N3T6 1108 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 KRTCAP2Q8N6L1 136 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 PLPP7Q8NBV4 271 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 TTC16Q8NEE8 873 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 FBXO30Q8TB52 745 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 FAM81AQ8TBF8 368 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 SLC22A17Q8WUG5 538 aa7.88□□□□□ -1.15
GPC3-204ENST00000631057 EZH1Q92800 747 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms