RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 IGFBP7Q16270 282 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 WSCD2Q2TBF2 565 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 SPDYAQ5MJ70 313 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 DOK6Q6PKX4 331 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 C22orf34Q6ZV56 151 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 SH2D5Q6ZV89 423 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF761Q86XN6 746 aaPredicted RBP4.77□□□□□ -1.65
LINC00550-201ENST00000629293 GKN2Q86XP6 184 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 CAMK1DQ8IU85 385 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 KCTD6Q8NC69 237 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 FBXO36Q8NEA4 188 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 C10orf82Q8WW14 230 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 TEKT4Q8WW24 435 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 HMCESQ96FZ2 354 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 SMC6Q96SB8 1091 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 PAFAH2Q99487 392 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 TMEM168Q9H0V1 697 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 LRRN3Q9H3W5 708 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 ZMAT4Q9H898 229 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 RRN3Q9NYV6 651 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 AKAP7Q9P0M2 348 aaPredicted RBP4.77□□□□□ -1.65
LINC00550-201ENST00000629293 LRIT1Q9P2V4 623 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 PCSK1NQ9UHG2 260 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 TEX264Q9Y6I9 313 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 CSNK1G3Q9Y6M4 447 aa4.77□□□□□ -1.65
LINC00550-201ENST00000629293 TMEM202A6NGA9 273 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 DRGXA6NNA5 263 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 A8MU76 341 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 VGLL3A8MV65 326 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CDRT15L2A8MXV6 281 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 GOLGA8MH3BSY2 632 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 TPP1O14773 563 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 RNF8O76064 485 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ALPIP09923 528 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 DHRS4L1P0CG22 281 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 TYRP1P17643 537 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 WT1P19544 449 aaPredicted RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ADRA1BP35368 520 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 MNAT1P51948 309 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SRP54P61011 504 aaKnown RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 KCNJ2P63252 427 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 FAPQ12884 760 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 MTA1Q13330 715 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CCDC14Q49A88 953 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SLC9A4Q6AI14 798 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SLC30A9Q6PML9 568 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 NPNTQ6UXI9 565 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 MACC1Q6ZN28 852 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 IGDCC3Q8IVU1 814 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 UNC5BQ8IZJ1 945 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 C4orf33Q8N1A6 199 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CCDC185Q8N715 623 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PQLC3Q8N755 202 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PLD5Q8N7P1 536 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 BANPQ8N9N5 519 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 FAM71DQ8N9W8 422 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PYROXD1Q8WU10 500 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PATE1Q8WXA2 126 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 HSPH1Q92598 858 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 RAB7BQ96AH8 199 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 RNF157Q96PX1 679 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 BOCQ9BWV1 1114 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PITPNM3Q9BZ71 974 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 KLC2Q9H0B6 622 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 IPPKQ9H8X2 491 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PLAC1Q9HBJ0 212 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 FGF22Q9HCT0 170 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SPTBP11277 2137 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 RHPN2P1A8MT19 583 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 C10orf142B7Z368 130 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CACNB4O00305 520 aaPredicted RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 TM9SF1O15321 606 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 UNC5CO95185 931 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF205O95201 554 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 RHCEP18577 417 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 KRT15P19012 456 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 STIP1P31948 543 aaKnown RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 GTF2A1P52655 376 aaPredicted RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 OR1D5P58170 312 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 TFDP2Q14188 446 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 C16orf72Q14CZ0 275 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PDK2Q15119 407 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 NKAIN2Q5VXU1 208 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 FAM47EQ6ZV65 393 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 MARK2Q7KZI7 788 aaKnown RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 OVCH2Q7RTZ1 564 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PIM3Q86V86 326 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ZC3H7AQ8IWR0 971 aaKnown RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 FSTL5Q8N475 847 aaPredicted RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PLA2G15Q8NCC3 412 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 FAM172AQ8WUF8 416 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SLC44A1Q8WWI5 657 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 HTR3CQ8WXA8 447 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 TBC1D31Q96DN5 1066 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 WBP1Q96G27 269 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 FAM46AQ96IP4 442 aaKnown RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 NUDT22Q9BRQ3 303 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 APOOQ9BUR5 198 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CARS2Q9HA77 564 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms