RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 NSUN3Q9H649 340 aaKnown RBP13.59□□□□□ -0.23
UBE3A-209ENST00000625778 OSER1Q9NX31 292 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 MED16Q9Y2X0 877 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 UGT2A1Q9Y4X1 527 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 A0A0G2JLL6 359 aaPredicted RBP13.59□□□□□ -0.23
UBE3A-209ENST00000625778 ILVBLA1L0T0 632 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 M0R129 80 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 E2F3O00716 465 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 PER2O15055 1255 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 ICMTO60725 284 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 SNAI1O95863 264 aaPredicted RBP13.59□□□□□ -0.23
UBE3A-209ENST00000625778 AZGP1P25311 298 aaKnown RBP13.59□□□□□ -0.23
UBE3A-209ENST00000625778 KRT20P35900 424 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 LIPAP38571 399 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 TBX4P57082 545 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 SETMARQ53H47 684 aaPredicted RBP13.59□□□□□ -0.23
UBE3A-209ENST00000625778 PRSS36Q5K4E3 855 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 TPRG1LQ5T0D9 272 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 PRRT2Q7Z6L0 340 aaPredicted RBP13.59□□□□□ -0.23
UBE3A-209ENST00000625778 SCD5Q86SK9 330 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 FAM20CQ8IXL6 584 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 NATD1Q8N6N6 113 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 GTF2H4Q92759 462 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 RHBDF1Q96CC6 855 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 KCNS3Q9BQ31 491 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 ZYG11BQ9C0D3 744 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 HOXD1Q9GZZ0 328 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 ACOT13Q9NPJ3 140 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 SNX6Q9UNH7 406 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 SAMHD1Q9Y3Z3 626 aaKnown RBP13.59□□□□□ -0.23
UBE3A-209ENST00000625778 MIA3Q5JRA6 1907 aa13.59□□□□□ -0.23
UBE3A-209ENST00000625778 RRN3P2A6NIE6 340 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 PDZK1P1A8MUH7 402 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 A8MX80 341 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 RGS5O15539 181 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 PGRP06401 933 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 ABCB1P08183 1280 aaPredicted RBP13.58□□□□□ -0.23
UBE3A-209ENST00000625778 CCDC159P0C7I6 412 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 CYP2C18P33260 490 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 IDH2P48735 452 aaKnown RBP13.58□□□□□ -0.23
UBE3A-209ENST00000625778 FCGRTP55899 365 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 CEP78Q5JTW2 689 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 GOLGA7Q7Z5G4 137 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 SVOPQ8N4V2 548 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 SETD9Q8NE22 299 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 ULK4Q96C45 1275 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 IFT52Q9Y366 437 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 PCDHGC4Q9Y5F7 938 aa13.58□□□□□ -0.23
UBE3A-209ENST00000625778 SH3BGRLO75368 114 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 SERPINF2P08697 491 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 MC4RP32245 332 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 CASP3P42574 277 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 DAPP51397 102 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 DGKEP52429 567 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 SNAP47Q5SQN1 464 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 YIPF6Q96EC8 236 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 REXO5Q96IC2 774 aaKnown RBP13.58□□□□□ -0.24
UBE3A-209ENST00000625778 BTN2A3PQ96KV6 586 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 RTP3Q9BQQ7 232 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 INPP5KQ9BT40 448 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 IRF2BPLQ9H1B7 796 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 FBXO8Q9NRD0 319 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 KRT84Q9NSB2 600 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 ERVK13-1Q9NX77 482 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 SPEF1Q9Y4P9 236 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 LTBP4Q8N2S1 1624 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 SCAMP3O14828 347 aaKnown RBP13.58□□□□□ -0.24
UBE3A-209ENST00000625778 PKMP14618 531 aaKnown RBP13.58□□□□□ -0.24
UBE3A-209ENST00000625778 HNRNPFP52597 415 aaKnown RBP13.58□□□□□ -0.24
UBE3A-209ENST00000625778 MVKQ03426 396 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 CPSF6Q16630 551 aaKnown RBP eCLIP13.58□□□□□ -0.24
UBE3A-209ENST00000625778 FBXL22Q6P050 247 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 MSANTD2Q6P1R3 559 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.58□□□□□ -0.24
UBE3A-209ENST00000625778 CYP2U1Q7Z449 544 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 LIMS2Q7Z4I7 341 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 RASAL3Q86YV0 1011 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 HIPK1Q86Z02 1210 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 BRSK1Q8TDC3 778 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 SLC10A4Q96EP9 437 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 OPTCQ9UBM4 332 aa13.58□□□□□ -0.24
UBE3A-209ENST00000625778 A0A0D9SEW6 157 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 AP3D1O14617 1153 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 NBNO60934 754 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 ITGB1P05556 798 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 SLC35A2P78381 396 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 CREMQ03060 361 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 GTF2H2Q13888 395 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 ACOX1Q15067 660 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 SPATS1Q496A3 300 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 SLC39A12Q504Y0 691 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 MANEALQ5VSG8 457 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 OVOS1Q6IE37 1185 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 ZCCHC8Q6NZY4 707 aaKnown RBP13.57□□□□□ -0.24
UBE3A-209ENST00000625778 GTF2H2CQ6P1K8 395 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 KLHDC8BQ8IXV7 354 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 TMEM86AQ8N2M4 240 aa13.57□□□□□ -0.24
UBE3A-209ENST00000625778 NKAPQ8N5F7 415 aaKnown RBP13.57□□□□□ -0.24
UBE3A-209ENST00000625778 DPP10Q8N608 796 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms