RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 ADAMTSL4Q6UY14 1074 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 ZFAND4Q86XD8 727 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 TRAPPC5Q8IUR0 188 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 KLHDC8AQ8IYD2 350 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 CFAP206Q8IYR0 622 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 RGL4Q8IZJ4 473 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 TDHQ8IZJ6 230 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 MINDY1Q8N5J2 469 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 VPS33AQ96AX1 596 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 MTFMTQ96DP5 389 aaKnown RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 HIC2Q96JB3 615 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 PKP4Q99569 1192 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 INTS7Q9NVH2 962 aaKnown RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 NMRK1Q9NWW6 199 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 STOX2Q9P2F5 926 aaPredicted RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 EPS15L1Q9UBC2 864 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 C5orf42Q9H799 3197 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 COL4A2P08572 1712 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 CCDC85CA6NKD9 419 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 ANHXE9PGG2 379 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 H3BM21 787 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 EEDO75530 441 aaKnown RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 C1orf105O95561 183 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 BAG2O95816 211 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 CATP04040 527 aaKnown RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 SLC2A4P14672 509 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 C5AR1P21730 350 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 SLC7A2P52569 658 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 RPS14P62263 151 aaKnown RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 RPL38P63173 70 aaKnown RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 AAK1Q2M2I8 961 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 PAGE3Q5JUK9 113 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 KIAA1211LQ6NV74 962 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 EP400NLQ6ZTU2 488 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 MTSS1LQ765P7 747 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 C11orf96Q7Z7L8 435 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 LRRC58Q96CX6 371 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 ASB9Q96DX5 294 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 CCDC138Q96M89 665 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 ZNF570Q96NI8 536 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 HOPXQ9BPY8 73 aaPredicted RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 ACPTQ9BZG2 426 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 ZNF576Q9H609 170 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 IL1RL2Q9HB29 575 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 GMPR2Q9P2T1 348 aaKnown RBP12.88□□□□□ -0.35
C3orf56-201ENST00000624688 ABCD2Q9UBJ2 740 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 CIDEBQ9UHD4 219 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 GPR34Q9UPC5 381 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 TMEM98Q9Y2Y6 226 aa12.88□□□□□ -0.35
C3orf56-201ENST00000624688 C17orf113A0A1B0GUU1 675 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 A0A1W2PP55 124 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 CCDC154A6NI56 674 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 NME4O00746 187 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 VEGFDO43915 354 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 POP7O75817 140 aaKnown RBP12.87□□□□□ -0.35
C3orf56-201ENST00000624688 ADH1BP00325 375 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 KRT6AP02538 564 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 KRT6BP04259 564 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 PCCBP05166 539 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 CD22P20273 847 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 IMPA1P29218 277 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 BMP8BP34820 402 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 MAPK9P45984 424 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 GNPDA1P46926 289 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 KRT6CP48668 564 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 NEK2P51955 445 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 GTF2H3Q13889 308 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 TRIM25Q14258 630 aaKnown RBP12.87□□□□□ -0.35
C3orf56-201ENST00000624688 CAPRIN1Q14444 709 aaKnown RBP12.87□□□□□ -0.35
C3orf56-201ENST00000624688 KIAA0040Q15053 153 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 WSCD2Q2TBF2 565 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 TLDC1Q6P9B6 456 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 AGTRAPQ6RW13 159 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 CRTC3Q6UUV7 619 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 DHDDSQ86SQ9 333 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 THOC6Q86W42 341 aaKnown RBP12.87□□□□□ -0.35
C3orf56-201ENST00000624688 HDDC3Q8N4P3 179 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 FBXO15Q8NCQ5 510 aaPredicted RBP12.87□□□□□ -0.35
C3orf56-201ENST00000624688 BHLHE22Q8NFJ8 381 aaPredicted RBP12.87□□□□□ -0.35
C3orf56-201ENST00000624688 NUDT8Q8WV74 236 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 ZNF514Q96K75 400 aaPredicted RBP12.87□□□□□ -0.35
C3orf56-201ENST00000624688 ANKRD27Q96NW4 1050 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 OR4K3Q96R72 315 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 PCDHAC1Q9H158 963 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 LRTM1Q9HBL6 345 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 MRPL40Q9NQ50 206 aaKnown RBP12.87□□□□□ -0.35
C3orf56-201ENST00000624688 ASIC5Q9NY37 505 aa12.87□□□□□ -0.35
C3orf56-201ENST00000624688 NVLO15381 856 aaKnown RBP12.86□□□□□ -0.35
C3orf56-201ENST00000624688 RNASEH1O60930 286 aaKnown RBP12.86□□□□□ -0.35
C3orf56-201ENST00000624688 PCDH8O95206 1070 aa12.86□□□□□ -0.35
C3orf56-201ENST00000624688 SLC16A8O95907 504 aa12.86□□□□□ -0.35
C3orf56-201ENST00000624688 JUPP14923 745 aa12.86□□□□□ -0.35
C3orf56-201ENST00000624688 JAK1P23458 1154 aa12.86□□□□□ -0.35
C3orf56-201ENST00000624688 SLC6A2P23975 617 aa12.86□□□□□ -0.35
C3orf56-201ENST00000624688 ATXN3P54252 364 aaPredicted RBP12.86□□□□□ -0.35
C3orf56-201ENST00000624688 CHIT1Q13231 466 aa12.86□□□□□ -0.35
C3orf56-201ENST00000624688 PRKG2Q13237 762 aa12.86□□□□□ -0.35
C3orf56-201ENST00000624688 NAE1Q13564 534 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms