RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 GCNT6Q5T4J0 391 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 PDE12Q6L8Q7 609 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 CES5AQ6NT32 575 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 C16orf62Q7Z3J2 963 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 OR4F6Q8NGB9 312 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 CLP1Q92989 425 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 BHMTQ93088 406 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 UBE2E3Q969T4 207 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 ZNF486Q96H40 463 aaPredicted RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 LRCH3Q96II8 777 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 MRGPRX2Q96LB1 330 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 C2orf49Q9BVC5 232 aaPredicted RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 SPATA5L1Q9BVQ7 753 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 NAA50Q9GZZ1 169 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 SACM1LQ9NTJ5 587 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 PTGFRNQ9P2B2 879 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 RAB23Q9ULC3 237 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 MAN2B2Q9Y2E5 1009 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 OR6C70A6NIJ9 312 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 PIRO00625 290 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 ZNF195O14628 629 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 PRRG1O14668 218 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 DFNA5O60443 496 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 MRPS6P82932 125 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 ZSWIM7Q19AV6 140 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 SDE2Q6IQ49 451 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 PNCKQ6P2M8 343 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 DHRS4L2Q6PKH6 230 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 PIWIL3Q7Z3Z3 882 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 OSTM1Q86WC4 334 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 CNTN4Q8IWV2 1026 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 LSMEM2Q8N112 164 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 OR52J3Q8NH60 311 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 LRRC20Q8TCA0 184 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 EMID1Q96A84 441 aaPredicted RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 MAELQ96JY0 434 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 NSUN5Q96P11 429 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 CIPCQ9C0C6 399 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 ADARB2Q9NS39 739 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 THUMPD1Q9NXG2 353 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 ENPP3O14638 875 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 NIPSNAP2O75323 286 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 UPK1BO75841 260 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 PFKMP08237 780 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 RPL10P27635 214 aaKnown RBP11.58□□□□□ -0.56
ATRX-214ENST00000624166 ALDH9A1P49189 494 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 RPIAP49247 311 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 HMGCS1Q01581 520 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 TUSC3Q13454 348 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 KCNJ8Q15842 424 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 AGAP7PQ5VUJ5 663 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 USP45Q70EL2 814 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 PRSS48Q7RTY5 328 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 TCF25Q9BQ70 676 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 SLC29A3Q9BZD2 475 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 MED28Q9H204 178 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 PRDM8Q9NQV8 689 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 ST3GAL5Q9UNP4 418 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 KIAA1551Q9HCM1 1747 aa11.58□□□□□ -0.56
ATRX-214ENST00000624166 FUCA1P04066 466 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 JUNBP17275 347 aaPredicted RBP11.57□□□□□ -0.56
ATRX-214ENST00000624166 MATN1P21941 496 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 NCS1P62166 190 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 TRNP1Q6NT89 227 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
ATRX-214ENST00000624166 SHKBP1Q8TBC3 707 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 DUS3LQ96G46 650 aaKnown RBP11.57□□□□□ -0.56
ATRX-214ENST00000624166 FRMD6Q96NE9 622 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 TMEM246Q9BRR3 403 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 POLR2J2Q9GZM3 115 aaKnown RBP11.57□□□□□ -0.56
ATRX-214ENST00000624166 ABCB9Q9NP78 766 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 CD300AQ9UGN4 299 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 FAM155AB1AL88 458 aaPredicted RBP11.57□□□□□ -0.56
ATRX-214ENST00000624166 CLCNKBP51801 687 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 RABGGTBP53611 331 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 CYBRD1Q53TN4 286 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 NOL9Q5SY16 702 aaKnown RBP11.57□□□□□ -0.56
ATRX-214ENST00000624166 ZFP90Q8TF47 636 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 LPPQ93052 612 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 QRFPRQ96P65 431 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 ALPK1Q96QP1 1244 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 SMOQ99835 787 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.57□□□□□ -0.56
ATRX-214ENST00000624166 KLHL1Q9NR64 748 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 GULP1Q9UBP9 304 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 SLC9A8Q9Y2E8 581 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 RPL36Q9Y3U8 105 aaKnown RBP11.57□□□□□ -0.56
ATRX-214ENST00000624166 PTGDR2Q9Y5Y4 395 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 KCNE2Q9Y6J6 123 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 SSNA1O43805 119 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 TLR5O60602 858 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 TACR2P21452 398 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 FDXRP22570 491 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 RCAN2Q14206 197 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 DSC3Q14574 896 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 SYVN1Q86TM6 617 aa11.57□□□□□ -0.56
ATRX-214ENST00000624166 TSPYL5Q86VY4 417 aaPredicted RBP11.57□□□□□ -0.56
ATRX-214ENST00000624166 TP53INP2Q8IXH6 220 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms