RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 BDKRB1P46663 353 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 MAZP56270 477 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 KRT33BQ14525 404 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 PHKG1Q16816 387 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 TTC23LQ6PF05 361 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 TMEM151AQ8N4L1 468 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 MCOLN3Q8TDD5 553 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 RAD51AP1Q96B01 352 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 TRIM54Q9BYV2 358 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 MRPL46Q9H2W6 279 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 STN1Q9H668 368 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 KIR3DX1Q9H7L2 352 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 NCKIPSDQ9NZQ3 722 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 MYO1CO00159 1063 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 SPAG7O75391 227 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 CKMT1AP12532 417 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 KCNC1P48547 511 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 AP1S2P56377 157 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 CDKL1Q00532 357 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 HHEXQ03014 270 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 GRB7Q14451 532 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 GPSM1Q86YR5 675 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 SCYL1Q96KG9 808 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 HGH1Q9BTY7 390 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 IQCGQ9H095 443 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 UCK1Q9HA47 277 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 MED4Q9NPJ6 270 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 XPR1Q9UBH6 696 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 EMCNQ9ULC0 261 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 RNF112Q9ULX5 631 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 PLLPQ9Y342 182 aa19.28■□□□□ 0.68
PDLIM2-221ENST00000622702 ANKRD12Q6UB98 2062 aa19.27■□□□□ 0.68
PDLIM2-221ENST00000622702 LY6G6EA0A0G2JKS1 128 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 PRAMEF33A0A0G2JMD5 474 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 MED19A0JLT2 244 aaPredicted RBP19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 SYCE1LA8MT33 242 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 TARM1B6A8C7 271 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 PRPF4O43172 522 aaKnown RBP eCLIP19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 HIST1H2AGP0C0S8 130 aaPredicted RBP19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 HIST1H2ADP20671 130 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 ACP1P24666 158 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 RPIAP49247 311 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 ACADVLP49748 655 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 PRKG2Q13237 762 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 TGFBIQ15582 683 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 CCDC153Q494R4 210 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 CCSMST1Q4G0I0 132 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 CDKL4Q5MAI5 379 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 C16orf46Q6P387 395 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 FRA10AC1Q70Z53 315 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 OR9A1PQ8NGU1 263 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 SH3KBP1Q96B97 665 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 HIST1H2AHQ96KK5 128 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 HIST1H2AJQ99878 128 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 H2AFJQ9BTM1 129 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 U3KQA8 63 aa19.27■□□□□ 0.67
PDLIM2-221ENST00000622702 TK2O00142 265 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 PPM1DO15297 605 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 NUDT21O43809 227 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 KDM1AO60341 852 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 PLIN3O60664 434 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 PROCP04070 461 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 ADRB1P08588 477 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 SBK3P0C264 359 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 DUSP3P51452 185 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 GPS2Q13227 327 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 NR0B2Q15466 257 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 HSP90B2PQ58FF3 399 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 TMEM26Q6ZUK4 368 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 ZNF438Q7Z4V0 828 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 OR6C4Q8NGE1 309 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 OR52E1Q8NGJ3 308 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 TCP10LQ8TDR4 215 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 CCDC138Q96M89 665 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 PKP4Q99569 1192 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 MENTQ9BUN1 341 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 EVA1BQ9NVM1 165 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 UTP6Q9NYH9 597 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 PADI4Q9UM07 663 aa19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 TDRKHQ9Y2W6 561 aaKnown RBP19.26■□□□□ 0.67
PDLIM2-221ENST00000622702 CPED1A4D0V7 1026 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 PABPN1LA6NDY0 278 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 RFPL3O75679 317 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 DKK1O94907 266 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 TPBGLP0DKB5 382 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 MTHFD2P13995 350 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 GLB1P16278 677 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 RPA3P35244 121 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 SLC18A1P54219 525 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 FOXC1Q12948 553 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 GPR18Q14330 331 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 ARL15Q9NXU5 204 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 NUDT4Q9NZJ9 180 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 SPATA7Q9P0W8 599 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 PCDHGA1Q9Y5H4 931 aa19.25■□□□□ 0.67
PDLIM2-221ENST00000622702 LILRA5A6NI73 299 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 TM9SF1O15321 606 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 ERGP11308 486 aa19.24■□□□□ 0.67
PDLIM2-221ENST00000622702 BIRC2Q13490 618 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms